RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CTDSPLO15194 276 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 IFNA4P05014 189 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 P2RY1P47900 373 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 IL18Q14116 193 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 RBMS2Q15434 407 aaKnown RBP9.63□□□□□ -0.87
RTN3-207ENST00000536011 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 TMEM268Q5VZI3 342 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 LEMD1Q68G75 181 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 ETFRF1Q6IPR1 90 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 SLC24A4Q8NFF2 622 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 Q8WTZ3 238 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 RAB2BQ8WUD1 216 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
RTN3-207ENST00000536011 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
RTN3-207ENST00000536011 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
RTN3-207ENST00000536011 KCNIP3Q9Y2W7 256 aa9.63□□□□□ -0.87
RTN3-207ENST00000536011 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
RTN3-207ENST00000536011 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 SPP1P10451 314 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
RTN3-207ENST00000536011 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
RTN3-207ENST00000536011 Q6ZRM9 215 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 OR4C16Q8NGL9 310 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 RSL24D1Q9UHA3 163 aaKnown RBP9.62□□□□□ -0.87
RTN3-207ENST00000536011 SCP2D1Q9UJQ7 156 aa9.62□□□□□ -0.87
RTN3-207ENST00000536011 K7EQG2 157 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 CTDSP2O14595 271 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 NPY1RP25929 384 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 OR10J1P30954 320 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 ALDH3B2P48448 385 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 RND2P52198 227 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 SPCS2Q15005 226 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 TIGITQ495A1 244 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 CLVS1Q8IUQ0 354 aaPredicted RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 CENPSQ8N2Z9 138 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
RTN3-207ENST00000536011 GPR132Q9UNW8 380 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
RTN3-207ENST00000536011 KMT2AQ03164 3969 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 HNRNPCP07910 306 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■□□ 17
RTN3-207ENST00000536011 ZNF688P0C7X2 276 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 ANXA3P12429 323 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 TMBIM6P55061 237 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 TCTAP57738 103 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 SRPXP78539 464 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
RTN3-207ENST00000536011 ANKRD20A5PA0PJZ0 165 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 A6NJY4 79 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 CCR6P51684 374 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
RTN3-207ENST00000536011 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
RTN3-207ENST00000536011 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
RTN3-207ENST00000536011 DHRS2Q13268 280 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 MLANAQ16655 118 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
RTN3-207ENST00000536011 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 HRH4Q9H3N8 390 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 U3KQ87 197 aa9.59□□□□□ -0.87
RTN3-207ENST00000536011 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 C11orf94C9JXX5 98 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 IFNA10P01566 189 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 IL4P05112 153 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 MIFP14174 115 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 FAUP35544 74 aaKnown RBP9.58□□□□□ -0.88
RTN3-207ENST00000536011 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
RTN3-207ENST00000536011 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 DYNC2LI1Q8TCX1 351 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
RTN3-207ENST00000536011 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 U3KQE9 123 aa9.58□□□□□ -0.88
RTN3-207ENST00000536011 TOMM40O96008 361 aa9.57□□□□□ -0.88
RTN3-207ENST00000536011 FABP1P07148 127 aa9.57□□□□□ -0.88
RTN3-207ENST00000536011 AP3S2P59780 193 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms