RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PRO1933Q9H354 126 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 TRAV5A0A0B4J249 113 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 A0A1W2PRE2 83 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 C8orf88P0DMB2 117 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 ADMP35318 185 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 COMPP49747 757 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-202ENST00000535906 CENPWQ5EE01 88 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 NEU4Q8WWR8 484 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-202ENST00000535906 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 FBXL15Q9H469 300 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 DNAJC4Q9NNZ3 241 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
VPS33B-202ENST00000535906 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-202ENST00000535906 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
VPS33B-202ENST00000535906 GGTLC3B5MD39 225 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 LGALS4P56470 323 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 ERVFC1-1P60608 527 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 MRPL41Q8IXM3 137 aaKnown RBP10.69□□□□□ -0.7
VPS33B-202ENST00000535906 RNF2Q99496 336 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 V9GYV3 84 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 FCN1O00602 326 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 OR5I1Q13606 314 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 RPEL1Q2QD12 228 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 PVRIGQ6DKI7 326 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 PATE2Q6UY27 113 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 DTX2Q86UW9 622 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 THAP8Q8NA92 274 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 FAM167A-AS1Q96KT0 104 aa10.69□□□□□ -0.7
VPS33B-202ENST00000535906 SELENOTP62341 195 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 UNQ6494/PRO21346Q6UXR6 183 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 IGFBPL1Q8WX77 278 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 SSBP3Q9BWW4 388 aaPredicted RBP10.68□□□□□ -0.7
VPS33B-202ENST00000535906 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 ABCA1O95477 2261 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
VPS33B-202ENST00000535906 TEX22C9J3V5 150 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 TIMM23O14925 209 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 NDUFS7O75251 213 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 CRYGCP07315 174 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 CBLN1P23435 193 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 CDKN1AP38936 164 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 KLRD1Q13241 179 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 REC114Q7Z4M0 266 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 HILPDAQ9Y5L2 63 aa10.68□□□□□ -0.7
VPS33B-202ENST00000535906 LOC105371242A0A075B767 164 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 IGHV3-21A0A0B4J1V1 117 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 SFTPCP11686 197 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 HTR1DP28221 377 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 UQCRFS1P47985 274 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 SUMO1P63165 101 aaKnown RBP10.67□□□□□ -0.7
VPS33B-202ENST00000535906 SSX2Q16385 188 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 TPTE2P1Q5T6R2 138 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 ZNF664Q8N3J9 261 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 OR11H6Q8NGC7 330 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 COX7A2P2O60397 106 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 TIGITQ495A1 244 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 LHFPL4Q7Z7J7 247 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 OR1L6Q8NGR2 347 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 NOL4LQ96MY1 436 aaPredicted RBP10.67□□□□□ -0.7
VPS33B-202ENST00000535906 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
VPS33B-202ENST00000535906 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 ZNF355PQ9NSJ1 428 aa10.67□□□□□ -0.7
VPS33B-202ENST00000535906 NUPR1O60356 82 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 MOSP00540 346 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 C10orf113Q5VZT2 155 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 OR5AU1Q8NGC0 362 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 SRSF12Q8WXF0 261 aaKnown RBP10.66□□□□□ -0.7
VPS33B-202ENST00000535906 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 A8MWP6 167 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 ISLRO14498 428 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 PYYP10082 97 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 CD24P25063 80 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
VPS33B-202ENST00000535906 ETFRF1Q6IPR1 90 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 OR8I2Q8N0Y5 310 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 OR1L4Q8NGR5 311 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 RNF5Q99942 180 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 TNFRSF19Q9NS68 423 aa10.66□□□□□ -0.7
VPS33B-202ENST00000535906 A0A1W2PRD5 423 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 A0A1W2PRF3 423 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 A0A1W2PRM7 423 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 GRIFINA4D1Z8 144 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 M0R1W7 72 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 PLGLAQ15195 96 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 ITLN2Q8WWU7 325 aaPredicted RBP10.65□□□□□ -0.7
VPS33B-202ENST00000535906 CFHR4Q92496 578 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 RNASE7Q9H1E1 156 aaKnown RBP10.65□□□□□ -0.7
VPS33B-202ENST00000535906 F11RQ9Y624 299 aaKnown RBP10.65□□□□□ -0.7
VPS33B-202ENST00000535906 MED13LQ71F56 2210 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
VPS33B-202ENST00000535906 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms