RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 POM121L12Q8N7R1 296 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
RPS3-220ENST00000534555 RRNAD1Q96FB5 475 aaKnown RBP11.47□□□□□ -0.57
RPS3-220ENST00000534555 TMEM56Q96MV1 263 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 SCRT1Q9BWW7 348 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 TMEM222Q9H0R3 208 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 KCNIP3Q9Y2W7 256 aa11.47□□□□□ -0.57
RPS3-220ENST00000534555 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 BAK1Q16611 211 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 STHQ8IWL8 128 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.57
RPS3-220ENST00000534555 ST8SIA2Q92186 375 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 SLC25A21Q9BQT8 299 aaPredicted RBP11.46□□□□□ -0.57
RPS3-220ENST00000534555 RNF126Q9BV68 326 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 CELA1Q9UNI1 258 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 X6R8D5 127 aa11.46□□□□□ -0.57
RPS3-220ENST00000534555 NAP1L6A6NFF2 107 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
RPS3-220ENST00000534555 ST8SIA3O43173 380 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 DFFBO76075 338 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 CDS2O95674 445 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 IGKV1-5P01602 117 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 MIFP14174 115 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 AKR1C4P17516 323 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 CNPY1Q3B7I2 92 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 FAM219AQ8IW50 185 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
RPS3-220ENST00000534555 AGRNO00468 2067 aa11.45□□□□□ -0.58
RPS3-220ENST00000534555 DEFB131BA0A096LNP1 70 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 DBX1A6NMT0 343 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 CENPXA8MT69 81 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 P0C879 139 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 ANXA3P12429 323 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 C4BPBP20851 252 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 MFAP4P55083 255 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
RPS3-220ENST00000534555 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
RPS3-220ENST00000534555 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 TMED4Q7Z7H5 227 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 TMEM230Q96A57 120 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 BATF3Q9NR55 127 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
RPS3-220ENST00000534555 PIGBOS1A0A0B4J2F0 54 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
RPS3-220ENST00000534555 I3L2K1 104 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 P0DMU3 169 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 FAM231AP0DMU4 169 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 FAM231CP0DMU5 169 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 IL7P13232 177 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 SRPXP78539 464 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
RPS3-220ENST00000534555 SELENOHQ8IZQ5 122 aaKnown RBP11.43□□□□□ -0.58
RPS3-220ENST00000534555 CENPSQ8N2Z9 138 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 IL22RA2Q969J5 263 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
RPS3-220ENST00000534555 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
RPS3-220ENST00000534555 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 A0A0B4J293 547 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 IFNA17P01571 189 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 AMBPP02760 352 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 IZUMO4Q1ZYL8 232 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 LGALS9BQ3B8N2 356 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 OR1P1Q8NH06 330 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 C7orf50Q9BRJ6 194 aaKnown RBP11.42□□□□□ -0.58
RPS3-220ENST00000534555 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 HSPG2P98160 4391 aa11.42□□□□□ -0.58
RPS3-220ENST00000534555 LINC00854A0A1B0GVQ3 168 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 MT-CO2P00403 227 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 ERHP84090 104 aaKnown RBP11.41□□□□□ -0.58
RPS3-220ENST00000534555 SLC35G3Q8N808 338 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 DUSP18Q8NEJ0 188 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 LHFPL5Q8TAF8 219 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 S100ZQ8WXG8 99 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 TXN2Q99757 166 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 CCDC32Q9BV29 185 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
RPS3-220ENST00000534555 PTTG2Q9NZH5 202 aa11.41□□□□□ -0.58
RPS3-220ENST00000534555 GNG7O60262 68 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 CD5P06127 495 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 CCR6P51684 374 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 SUPT4H1P63272 117 aaKnown RBP11.4□□□□□ -0.58
RPS3-220ENST00000534555 MORN3Q6PF18 240 aaPredicted RBP11.4□□□□□ -0.58
RPS3-220ENST00000534555 LGI3Q8N145 548 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.58
RPS3-220ENST00000534555 GINS3Q9BRX5 216 aa11.4□□□□□ -0.58
RPS3-220ENST00000534555 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms