RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NARS2Q96I59 477 aaKnown RBP6.53□□□□□ -1.36
COPB1-211ENST00000534234 LYSTQ99698 3801 aa6.53□□□□□ -1.36
COPB1-211ENST00000534234 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
COPB1-211ENST00000534234 ANKRD20A5PA0PJZ0 165 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 LCE2BO14633 110 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 CA1P00915 261 aaPredicted RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 SLC25A4P12235 298 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 P2RY1P47900 373 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 RND2P52198 227 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 TMEM187Q14656 261 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 RBMS2Q15434 407 aaKnown RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 STHQ8IWL8 128 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 SLC24A4Q8NFF2 622 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 RNASEH2CQ8TDP1 164 aaKnown RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 PHLDA1Q8WV24 401 aaPredicted RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 SCGB3A2Q96PL1 93 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 CCDC59Q9P031 241 aaKnown RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 RSL24D1Q9UHA3 163 aaKnown RBP6.52□□□□□ -1.36
COPB1-211ENST00000534234 SCP2D1Q9UJQ7 156 aa6.52□□□□□ -1.36
COPB1-211ENST00000534234 FABP12A6NFH5 140 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 K7EQG2 157 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 GSTZ1O43708 216 aaPredicted RBP6.52□□□□□ -1.37
COPB1-211ENST00000534234 NXPH3O95157 252 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 SULT1A3P0DMM9 295 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 SULT1A4P0DMN0 295 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 OR10J1P30954 320 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 TNFSF8P32971 234 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.37
COPB1-211ENST00000534234 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 C11orf45Q8TAV5 145 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 TMEM170AQ8WVE7 144 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 IL22RA2Q969J5 263 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 BCL7BQ9BQE9 202 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 MCUBQ9NWR8 336 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 PRR13Q9NZ81 148 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 U3KQE9 123 aa6.52□□□□□ -1.37
COPB1-211ENST00000534234 DEFB4AO15263 64 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 IFNA10P01566 189 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 AKR1C4P17516 323 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 NPY1RP25929 384 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
COPB1-211ENST00000534234 AP2S1P53680 142 aaPredicted RBP6.51□□□□□ -1.37
COPB1-211ENST00000534234 NANOS2P60321 138 aaKnown RBP6.51□□□□□ -1.37
COPB1-211ENST00000534234 NMSQ5H8A3 153 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 ETFRF1Q6IPR1 90 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 LYZL2Q7Z4W2 148 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 NPIPB3Q92617 1050 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 ACY3Q96HD9 319 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 SOSTQ9BQB4 213 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
COPB1-211ENST00000534234 MFFQ9GZY8 342 aa6.51□□□□□ -1.37
COPB1-211ENST00000534234 A0A0B4J2A0 478 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 HELTA6NFD8 242 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 KNCNA6PVL3 124 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 IFNA4P05014 189 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 HNRNPCP07910 306 aaKnown RBP eCLIP6.5□□□□□ -1.372e-7■■■□□ 15.2
COPB1-211ENST00000534234 RD3LP0DJH9 198 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 CCR6P51684 374 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 SUPT4H1P63272 117 aaKnown RBP6.5□□□□□ -1.37
COPB1-211ENST00000534234 DHRS2Q13268 280 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
COPB1-211ENST00000534234 C11orf68Q9H3H3 251 aaKnown RBP6.5□□□□□ -1.37
COPB1-211ENST00000534234 FBXL17Q9UF56 701 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 SHPKQ9UHJ6 478 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 U3KQ87 197 aa6.5□□□□□ -1.37
COPB1-211ENST00000534234 H3BMQ9 156 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 NOL3O60936 208 aaKnown RBP6.49□□□□□ -1.37
COPB1-211ENST00000534234 IL4P05112 153 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 GIG44P09565 113 aaPredicted RBP6.49□□□□□ -1.37
COPB1-211ENST00000534234 SPP1P10451 314 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 ANXA3P12429 323 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 SMCO1Q147U7 214 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 USF2Q15853 346 aaPredicted RBP6.49□□□□□ -1.37
COPB1-211ENST00000534234 ACTL10Q5JWF8 245 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 MORN3Q6PF18 240 aaPredicted RBP6.49□□□□□ -1.37
COPB1-211ENST00000534234 LGI3Q8N145 548 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 MCFD2Q8NI22 146 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 DTD1Q8TEA8 209 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 GLMPQ8WWB7 406 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 RBKSQ9H477 322 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 HSPB7Q9UBY9 170 aa6.49□□□□□ -1.37
COPB1-211ENST00000534234 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
COPB1-211ENST00000534234 BUB3O43684 328 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 TOMM40O96008 361 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 PSG1P11464 419 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 ATP5IP56385 69 aaPredicted RBP6.48□□□□□ -1.37
COPB1-211ENST00000534234 SRPXP78539 464 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 KLF9Q13886 244 aaPredicted RBP6.48□□□□□ -1.37
COPB1-211ENST00000534234 TMEM41BQ5BJD5 291 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 PSMG4Q5JS54 123 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 LGALS9CQ6DKI2 356 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 RAB40CQ96S21 281 aa6.48□□□□□ -1.37
COPB1-211ENST00000534234 FAUP35544 74 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms