RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RNF125Q96EQ8 232 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 CRIM1Q9NZV1 1036 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 GNG5P63218 68 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 PRSS8Q16651 343 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 ZNF841Q6ZN19 808 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 Q6ZR03 302 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 FAM168AQ92567 244 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 CBY1Q9Y3M2 126 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 TBL2Q9Y4P3 447 aaKnown RBP12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 PHLDA3Q9Y5J5 127 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 NMUP48645 174 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 LEMD1Q68G75 181 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 CIARTQ8N365 385 aaPredicted RBP12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 AGMATQ9BSE5 352 aa12.58□□□□□ -0.4
PCDHA3-202ENST00000532566 IGHV3OR16-8A0A075B7F1 116 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 C5orf52A6NGY3 159 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 ITGB1BP1O14713 200 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 C9JQL5 133 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 LINC01551Q86U37 167 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 C1QL4Q86Z23 238 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 NCOA6Q14686 2063 aaPredicted RBP12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 H0YJW9 148 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 TNFSF13O75888 250 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 SCGB1C2P0DMR2 95 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 REC114Q7Z4M0 266 aa12.57□□□□□ -0.4
PCDHA3-202ENST00000532566 GPX1P07203 203 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 DMRTA2Q96SC8 542 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 ATOH7Q8N100 152 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 RPRMLQ8N4K4 120 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 TECTAO75443 2155 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 ZNF207O43670 478 aaKnown RBP12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 MYOD1P15172 320 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 PAX9P55771 341 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 Q6AWC8 147 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
PCDHA3-202ENST00000532566 TRAV5A0A0B4J249 113 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 SERF1AO75920 110 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 Q8NFD4 153 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 FREM1Q5H8C1 2179 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 HINT1P49773 126 aaPredicted RBP12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 SLC25A34Q6PIV7 304 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 CLEC19AQ6UXS0 136 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 MUC6Q6W4X9 2439 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 MALRD1Q5VYJ5 2156 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 IGHV3-66A0A0C4DH42 116 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 ADMP35318 185 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 TCTAP57738 103 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 DERL1Q9BUN8 251 aa12.55□□□□□ -0.4
PCDHA3-202ENST00000532566 SOD3P08294 240 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 IL15RAQ13261 267 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 C12orf54Q6X4T0 127 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 LY6DQ14210 128 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 FAM90A2PQ658T7 463 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 SSC4DQ8WTU2 575 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 KIAA1549LQ6ZVL6 1849 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 PLCE1Q9P212 2302 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 WNT2P09544 360 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 C8orf46Q8TAG6 207 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 C9JCJ5 164 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
PCDHA3-202ENST00000532566 FBLL1A6NHQ2 334 aaKnown RBP12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 IGLV1-44P01699 117 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 GATA4P43694 442 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 FOXL1Q12952 345 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 AREGP15514 252 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 PET117Q6UWS5 81 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 RNF5Q99942 180 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 A0A1B0GW15 77 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 LYRM7Q5U5X0 104 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 LYPD2Q6UXB3 125 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
PCDHA3-202ENST00000532566 C3orf36Q3SXR2 165 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 ZNF600Q6ZNG1 722 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 FAM19A2Q8N3H0 131 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 SYT8Q8NBV8 401 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 OR4C46A6NHA9 309 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 PRELID3AQ96N28 172 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 HIST1H2BLQ99880 126 aa12.52□□□□□ -0.4
PCDHA3-202ENST00000532566 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.41
PCDHA3-202ENST00000532566 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms