RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 C9JCJ5 164 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SPINT2O43291 252 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZIC3O60481 467 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 YPEL1O60688 119 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 GNLYP22749 145 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 CTRLP40313 264 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 KLRB1Q12918 225 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 ZNF418Q8TF45 676 aaPredicted RBP5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 YPEL2Q96QA6 119 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SHANK1Q9Y566 2161 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 DEFA4P12838 97 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 FKBP2P26885 142 aaKnown RBP5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 LGALS7P47929 136 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 RNF144BQ7Z419 303 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 RND1Q92730 232 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 UFC1Q9Y3C8 167 aa5.66□□□□□ -1.5
TGFBR3-209ENST00000532540 LOC389332A0A1B0GUA5 103 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 F8W1H4 67 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 CLPSP04118 112 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 TCTEX1D4Q5JR98 221 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 CCDC144NLQ6NUI1 221 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 LINC01560Q8TB33 94 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 PGLYRP4Q96LB8 373 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 HES4Q9HCC6 221 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 TMEM140Q9NV12 185 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 SSUH2Q9Y2M2 353 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 LY96Q9Y6Y9 160 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 HELZ2Q9BYK8 2649 aaKnown RBP5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 USP24Q9UPU5 2620 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 ACANP16112 2415 aa5.65□□□□□ -1.5
TGFBR3-209ENST00000532540 EML5Q05BV3 1969 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 TRGV10A0A0A0MS01 117 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 A0A1W2PQD3 144 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 LIPT2A6NK58 231 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 MLNRO43193 412 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 SYNGR1O43759 233 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 CGAP01215 116 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 IGHMP01871 453 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM27E3Q08E93 113 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 HES1Q14469 280 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 Q1RN00 199 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 BCL6BQ8N143 479 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 ZBTB34Q8NCN2 500 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 RNF166Q96A37 237 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 PNRC2Q9NPJ4 139 aaKnown RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 TNFRSF19Q9NS68 423 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 MBNL3Q9NUK0 354 aaKnown RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 KIAA1549LQ6ZVL6 1849 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 NOTCH3Q9UM47 2321 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 MUC22E2RYF6 1773 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1D-13A0A0B4J2D9 117 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 EFNA2O43921 213 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 FCGR3BO75015 233 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 APOHP02749 345 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1-13P0DP09 117 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 GATA2P23769 480 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 PSMB2P49721 201 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 RAC3P60763 192 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 FOXF2Q12947 444 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 RASL11AQ6T310 242 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF114Q8NC26 417 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF837Q96EG3 531 aaPredicted RBP5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 ZC2HC1AQ96GY0 325 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 S1PR3Q99500 378 aa5.65□□□□□ -1.51
TGFBR3-209ENST00000532540 ATMQ13315 3056 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 YLPM1P49750 1951 aaKnown RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A10PA6NDY2 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A18PA6NE21 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A16PA6NEW6 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A20PA6NIJ5 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A8PA6NJQ4 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A7PA6NKC0 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 HIGD1CA8MV81 97 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A22PA8MWA6 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A12PA8MX19 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A5PA8MXJ8 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A23PA8MXZ1 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 MS4A18H0YCH9 400 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A15PP0C7V4 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A13PP0C7W8 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A14PP0C7W9 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FAM90A24PP0C7X0 464 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 COX8AP10176 69 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 OPRK1P41145 380 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 EMP1P54849 157 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 FOXG1P55316 489 aaPredicted RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 MS4A18Q3C1V0 323 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 CXorf67Q86X51 503 aaPredicted RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 DEFB108BQ8NET1 73 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 VGLL1Q99990 258 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 YAE1D1Q9NRH1 226 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 SPRR3Q9UBC9 169 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 AMMECR1Q9Y4X0 333 aaPredicted RBP5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1D-43A0A0B4J1Z2 117 aa5.64□□□□□ -1.51
TGFBR3-209ENST00000532540 TRAV5A0A0B4J249 113 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms