RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 DEFB4AO15263 64 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 RBMS2Q15434 407 aaKnown RBP11.51□□□□□ -0.57
CPSF1-205ENST00000531042 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
CPSF1-205ENST00000531042 OR1S2Q8NGQ3 325 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 RNASEH2CQ8TDP1 164 aaKnown RBP11.51□□□□□ -0.57
CPSF1-205ENST00000531042 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
CPSF1-205ENST00000531042 FBXL17Q9UF56 701 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
CPSF1-205ENST00000531042 U3KQE9 123 aa11.51□□□□□ -0.57
CPSF1-205ENST00000531042 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 CEBPZOSA8MTT3 80 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 GIG44P09565 113 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-205ENST00000531042 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 SLC25A4P12235 298 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 RND2P52198 227 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 IL18Q14116 193 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
CPSF1-205ENST00000531042 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 Q8WTZ3 238 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 DIRAS2Q96HU8 199 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 PRRT1Q99946 306 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 TMEM56-RWDD3S4R434 201 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 AGRNO00468 2067 aa11.5□□□□□ -0.57
CPSF1-205ENST00000531042 IFNA4P05014 189 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 OR10J1P30954 320 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 YPEL3P61236 119 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-205ENST00000531042 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-205ENST00000531042 OR51S1Q8NGJ8 323 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 RABL2AQ9UBK7 228 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-205ENST00000531042 RABL2BQ9UNT1 228 aa11.49□□□□□ -0.57
CPSF1-205ENST00000531042 ANKRD20A5PA0PJZ0 165 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 KNCNA6PVL3 124 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPSF1-205ENST00000531042 SPP1P10451 314 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
CPSF1-205ENST00000531042 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 CLVS1Q8IUQ0 354 aaPredicted RBP11.48□□□□□ -0.57
CPSF1-205ENST00000531042 Q8NAQ8 132 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 IL22RA2Q969J5 263 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 BCL7BQ9BQE9 202 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 CACFD1Q9UGQ2 172 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 KCNIP3Q9Y2W7 256 aa11.48□□□□□ -0.57
CPSF1-205ENST00000531042 HELTA6NFD8 242 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 GSTZ1O43708 216 aaPredicted RBP11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
CPSF1-205ENST00000531042 DEDDO75618 318 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NXPH3O95157 252 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 SULT1A3P0DMM9 295 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 SULT1A4P0DMN0 295 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NPY1RP25929 384 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 AP2S1P53680 142 aaPredicted RBP11.47□□□□□ -0.57
CPSF1-205ENST00000531042 TMBIM6P55061 237 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 DHRS2Q13268 280 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NMSQ5H8A3 153 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NOXA1Q86UR1 476 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 DYNC2LI1Q8TCX1 351 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 C2CD4CQ8TF44 421 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 PRR13Q9NZ81 148 aa11.47□□□□□ -0.57
CPSF1-205ENST00000531042 CCDC59Q9P031 241 aaKnown RBP11.47□□□□□ -0.57
CPSF1-205ENST00000531042 IL4P05112 153 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 RBMY1A1P0DJD3 496 aaKnown RBP11.46□□□□□ -0.57
CPSF1-205ENST00000531042 RBMY1CP0DJD4 496 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 C4BPBP20851 252 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 RBMY1FQ15415 496 aaKnown RBP11.46□□□□□ -0.57
CPSF1-205ENST00000531042 USF2Q15853 346 aaPredicted RBP11.46□□□□□ -0.57
CPSF1-205ENST00000531042 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 HRH4Q9H3N8 390 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.57
CPSF1-205ENST00000531042 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-205ENST00000531042 TOMM40O96008 361 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 MIFP14174 115 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 TCTAP57738 103 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 PSMG4Q5JS54 123 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 SCGB3A2Q96PL1 93 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 RAB40CQ96S21 281 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 HSPB7Q9UBY9 170 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 U3KQ87 197 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 X6R8D5 127 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 VPS13DQ5THJ4 4388 aa11.45□□□□□ -0.58
CPSF1-205ENST00000531042 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 BUB3O43684 328 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 IFNA10P01566 189 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 RD3LP0DJH9 198 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 CCR6P51684 374 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 SUPT4H1P63272 117 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms