RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 JTBO76095 146 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 MT-CO2P00403 227 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 IGLV1-40P01703 118 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 C1QBP02746 253 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 HSPB1P04792 205 aaKnown RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 CD5P06127 495 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 METTL15P1P0C7V9 234 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 RNASE2P10153 161 aaKnown RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 EGR2P11161 476 aaPredicted RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 MYOD1P15172 320 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 CXCL3P19876 107 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 PPIFP30405 207 aaKnown RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 FCGR2BP31994 310 aaPredicted RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ARL3P36405 182 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 CD69Q07108 199 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ZNF616Q08AN1 781 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ZNF345Q14585 488 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 BSXQ3C1V8 233 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM95Q3KNT9 176 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 PXDC1Q5TGL8 231 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 PVRIGQ6DKI7 326 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 TEPPQ6URK8 271 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM14EPQ6UXP3 125 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 Q6ZRG5 221 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ACOT7LQ6ZUV0 252 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM252Q8N6L7 170 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM217Q8N7C4 229 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 RNF152Q8N8N0 203 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 BPIFCQ8NFQ6 507 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 OR4X1Q8NH49 305 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 Q8WTZ3 238 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ACY3Q96HD9 319 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 FAM210AQ96ND0 272 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 AQP10Q96PS8 301 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ATP5SQ99766 215 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 ELOVL1Q9BW60 279 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 MFFQ9GZY8 342 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 NPVFQ9HCQ7 196 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 PEF1Q9UBV8 284 aaKnown RBP3.73□□□□□ -1.81
SSBP3-213ENST00000530618 UFC1Q9Y3C8 167 aa3.73□□□□□ -1.81
SSBP3-213ENST00000530618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.72□□□□□ -1.81
SSBP3-213ENST00000530618 UBE2L5PA0A1B0GUS4 154 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 A0A1W2PRX2 142 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 A0A1W2PS18 150 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 OR2T8A6NH00 312 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 C15orf62A8K5M9 175 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ARPC5O15511 151 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 CLN5O75503 358 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 CST7O76096 145 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 YIF1AO95070 293 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 MBP02144 154 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 RPLP1P05386 114 aaKnown RBP3.72□□□□□ -1.81
SSBP3-213ENST00000530618 LYL1P12980 280 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 OR10J1P30954 320 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 GPR183P32249 361 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 RND2P52198 227 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 RUNX1Q01196 453 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 EWSR1Q01844 656 aaKnown RBP eCLIP3.72□□□□□ -1.81
SSBP3-213ENST00000530618 CFHR3Q02985 330 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 MRGPRG-AS1Q2M3A8 158 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 KLK9Q2XQG4 91 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 NSUN5P1Q3KNT7 163 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 C19orf54Q5BKX5 351 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 SAMD13Q5VXD3 122 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ZNF343Q6P1L6 599 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ZNF600Q6ZNG1 722 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 LCNL1Q6ZST4 164 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM144Q7Z5S9 345 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ZNF491Q8N8L2 437 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 TMEM116Q8NCL8 245 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 OR1L4Q8NGR5 311 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 SCARB1Q8WTV0 552 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 MARC2Q969Z3 335 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 GNPNAT1Q96EK6 184 aaPredicted RBP3.72□□□□□ -1.81
SSBP3-213ENST00000530618 WDR89Q96FK6 387 aaPredicted RBP3.72□□□□□ -1.81
SSBP3-213ENST00000530618 GRAMD2BQ96HH9 432 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 METTL26Q96S19 204 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 PFDN5Q99471 154 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ARPC5LQ9BPX5 153 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 KLK9Q9UKQ9 250 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 HSPB11Q9Y547 144 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 DNAH6Q9C0G6 4158 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 VPS13DQ5THJ4 4388 aa3.72□□□□□ -1.81
SSBP3-213ENST00000530618 ELOA3CA0A087WX78 387 aaPredicted RBP3.71□□□□□ -1.82
SSBP3-213ENST00000530618 ZNF320A2RRD8 509 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 ANKRD34BA5PLL1 514 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 FAM24AA6NFZ4 105 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 CGB1A6NKQ9 187 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 LINC01548A6NM66 108 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 E7EUB6 86 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 TEX46H3BTG2 121 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 I3L2K1 104 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 CCL24O00175 119 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 NDUFA4O00483 81 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 TGOLN2O43493 480 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 NDUFB8O95169 186 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 IGHV3-11P01762 117 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 PRH1P02810 166 aa3.71□□□□□ -1.82
SSBP3-213ENST00000530618 PRB2P02812 416 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms