RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 NAA60Q9H7X0 242 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 V9GYH0 126 aa9.5□□□□□ -0.89
CPSF1-204ENST00000529288 TRAV30A0A087WSZ9 112 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 K7EQG2 157 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 B3GALNT1O75752 331 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 CDS2O95674 445 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 CRYBB3P26998 211 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 RND2P52198 227 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 DHODHQ02127 395 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 IL18Q14116 193 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 ZNF79Q15937 498 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 ACTL10Q5JWF8 245 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 FAM219AQ8IW50 185 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 GLYATL2Q8WU03 294 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 RBPMSQ93062 196 aaKnown RBP9.49□□□□□ -0.89
CPSF1-204ENST00000529288 C11orf68Q9H3H3 251 aaKnown RBP9.49□□□□□ -0.89
CPSF1-204ENST00000529288 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 PRR13Q9NZ81 148 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 RABL2AQ9UBK7 228 aaPredicted RBP9.49□□□□□ -0.89
CPSF1-204ENST00000529288 RABL2BQ9UNT1 228 aa9.49□□□□□ -0.89
CPSF1-204ENST00000529288 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 CCDC160A6NGH7 325 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 IGLL5B9A064 214 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 HNRNPCP07910 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
CPSF1-204ENST00000529288 AKAIN1P0CW23 69 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 OR10J1P30954 320 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 EIF2B2P49770 351 aaKnown RBP9.48□□□□□ -0.89
CPSF1-204ENST00000529288 LGALS9CQ6DKI2 356 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 CENPSQ8N2Z9 138 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 OR1S2Q8NGQ3 325 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 OR52E5Q8NH55 327 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 TRIM63Q969Q1 353 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 ACY3Q96HD9 319 aa9.48□□□□□ -0.89
CPSF1-204ENST00000529288 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 FABP12A6NFH5 140 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 BSXQ3C1V8 233 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 MORN3Q6PF18 240 aaPredicted RBP9.47□□□□□ -0.89
CPSF1-204ENST00000529288 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
CPSF1-204ENST00000529288 CCDC190Q86UF4 302 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 OR51S1Q8NGJ8 323 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 RNASEH2CQ8TDP1 164 aaKnown RBP9.47□□□□□ -0.89
CPSF1-204ENST00000529288 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 GPR132Q9UNW8 380 aa9.47□□□□□ -0.89
CPSF1-204ENST00000529288 HELTA6NFD8 242 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 CRYM-AS1A6NIL9 109 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 IFNA10P01566 189 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 IL4P05112 153 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 IGLC1P0CG04 106 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 SPP1P10451 314 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 SLC25A4P12235 298 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 C4BPBP20851 252 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 NPY1RP25929 384 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 C2orf83Q53S99 150 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 PRRT1Q99946 306 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 MCUBQ9NWR8 336 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 KCNIP3Q9Y2W7 256 aa9.46□□□□□ -0.9
CPSF1-204ENST00000529288 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 RBMY1A1P0DJD3 496 aaKnown RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 RD3LP0DJH9 198 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 AKR1C4P17516 323 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 AP2S1P53680 142 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 SURF2Q15527 256 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 USF2Q15853 346 aaPredicted RBP9.45□□□□□ -0.9
CPSF1-204ENST00000529288 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 Q8NAQ8 132 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 RAB40CQ96S21 281 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 PBDC1Q9BVG4 233 aa9.45□□□□□ -0.9
CPSF1-204ENST00000529288 MIFP14174 115 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 AARDQ4LEZ3 155 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 TMEM41BQ5BJD5 291 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 OR51G1Q8NGK1 321 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 TMEM170AQ8WVE7 144 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 GLMPQ8WWB7 406 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 TBC1D24Q9ULP9 559 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 TMEM56-RWDD3S4R434 201 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 U3KQE9 123 aa9.44□□□□□ -0.9
CPSF1-204ENST00000529288 TOMM40O96008 361 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
CPSF1-204ENST00000529288 PRR20EP86478 221 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 PRR20CP86479 221 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 PRR20DP86480 221 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 PRR20BP86481 221 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms