RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 DUXBA0A1W2PPF3 345 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 NPY1RP25929 384 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 SMCO1Q147U7 214 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 LYG2Q86SG7 212 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 APRG1Q8IVJ8 170 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 GBGT1Q8N5D6 347 aa17.09■□□□□ 0.33
PKP3-206ENST00000528036 IGKV1-17P01599 117 aa17.08■□□□□ 0.32
PKP3-206ENST00000528036 AKR1C4P17516 323 aa17.08■□□□□ 0.32
PKP3-206ENST00000528036 AP2S1P53680 142 aaPredicted RBP17.08■□□□□ 0.32
PKP3-206ENST00000528036 PRSS54Q6PEW0 395 aa17.08■□□□□ 0.32
PKP3-206ENST00000528036 TOMM5Q8N4H5 51 aa17.08■□□□□ 0.32
PKP3-206ENST00000528036 CSMD3Q7Z407 3707 aa17.08■□□□□ 0.32
PKP3-206ENST00000528036 NUPR2A6NF83 97 aa17.07■□□□□ 0.32
PKP3-206ENST00000528036 IGLC1P0CG04 106 aa17.07■□□□□ 0.32
PKP3-206ENST00000528036 MLANAQ16655 118 aa17.07■□□□□ 0.32
PKP3-206ENST00000528036 PYDC2Q56P42 97 aa17.07■□□□□ 0.32
PKP3-206ENST00000528036 SLC25A21Q9BQT8 299 aaPredicted RBP17.07■□□□□ 0.32
PKP3-206ENST00000528036 HSPB7Q9UBY9 170 aa17.07■□□□□ 0.32
PKP3-206ENST00000528036 A0A0J9YWU9 116 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 HELTA6NFD8 242 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 IFNA10P01566 189 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 APOHP02749 345 aaPredicted RBP17.06■□□□□ 0.32
PKP3-206ENST00000528036 OR10J1P30954 320 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 RND2P52198 227 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 TIGITQ495A1 244 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 TMEM41BQ5BJD5 291 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 MRPL36Q9P0J6 103 aaKnown RBP17.06■□□□□ 0.32
PKP3-206ENST00000528036 PFDN2Q9UHV9 154 aa17.06■□□□□ 0.32
PKP3-206ENST00000528036 DYNC2H1Q8NCM8 4307 aaKnown RBP17.05■□□□□ 0.32
PKP3-206ENST00000528036 P2RY1P47900 373 aa17.05■□□□□ 0.32
PKP3-206ENST00000528036 KLF9Q13886 244 aaPredicted RBP17.05■□□□□ 0.32
PKP3-206ENST00000528036 LILRB2Q8N423 598 aa17.05■□□□□ 0.32
PKP3-206ENST00000528036 DTD1Q8TEA8 209 aa17.05■□□□□ 0.32
PKP3-206ENST00000528036 RABAC1Q9UI14 185 aa17.05■□□□□ 0.32
PKP3-206ENST00000528036 CXorf65A6NEN9 183 aa17.04■□□□□ 0.32
PKP3-206ENST00000528036 CCDC160A6NGH7 325 aa17.04■□□□□ 0.32
PKP3-206ENST00000528036 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
PKP3-206ENST00000528036 NUP62P37198 522 aaPredicted RBP17.04■□□□□ 0.32
PKP3-206ENST00000528036 SUPT4H1P63272 117 aaKnown RBP17.04■□□□□ 0.32
PKP3-206ENST00000528036 U3KQE9 123 aa17.04■□□□□ 0.32
PKP3-206ENST00000528036 IGHV3-66A0A0C4DH42 116 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 ZNF701M0R085 212 aaPredicted RBP17.03■□□□□ 0.32
PKP3-206ENST00000528036 SLC25A6P12236 298 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 DEFB131AP59861 70 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 LYZL2Q7Z4W2 148 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 STHQ8IWL8 128 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 TRIM63Q969Q1 353 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 KLK5Q9Y337 293 aaPredicted RBP17.03■□□□□ 0.32
PKP3-206ENST00000528036 STARD9Q9P2P6 4700 aa17.03■□□□□ 0.32
PKP3-206ENST00000528036 K7EQG2 157 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 FABP1P07148 127 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 RD3LP0DJH9 198 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 GPX4P36969 197 aaPredicted RBP17.02■□□□□ 0.32
PKP3-206ENST00000528036 LRTM2Q8N967 370 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 STXBP6Q8NFX7 210 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 OR1S1Q8NH92 325 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 NPIPB3Q92617 1050 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 RARRES2Q99969 163 aa17.02■□□□□ 0.32
PKP3-206ENST00000528036 SEPSECSQ9HD40 501 aaKnown RBP17.02■□□□□ 0.32
PKP3-206ENST00000528036 FAM90A26D6RGX4 464 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 MED6O75586 246 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 TOMM40O96008 361 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 IFNA4P05014 189 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 SPANXN2Q5MJ10 180 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 MORN3Q6PF18 240 aaPredicted RBP17.01■□□□□ 0.31
PKP3-206ENST00000528036 RBKSQ9H477 322 aa17.01■□□□□ 0.31
PKP3-206ENST00000528036 CEMP1Q6PRD7 247 aaPredicted RBP17■□□□□ 0.31
PKP3-206ENST00000528036 C16orf54Q6UWD8 224 aa17■□□□□ 0.31
PKP3-206ENST00000528036 TMED4Q7Z7H5 227 aa17■□□□□ 0.31
PKP3-206ENST00000528036 TMEM170AQ8WVE7 144 aa17■□□□□ 0.31
PKP3-206ENST00000528036 ACY3Q96HD9 319 aa17■□□□□ 0.31
PKP3-206ENST00000528036 MFFQ9GZY8 342 aa17■□□□□ 0.31
PKP3-206ENST00000528036 TMED3Q9Y3Q3 217 aa17■□□□□ 0.31
PKP3-206ENST00000528036 V9GYH0 126 aa17■□□□□ 0.31
PKP3-206ENST00000528036 CA1P00915 261 aaPredicted RBP16.99■□□□□ 0.31
PKP3-206ENST00000528036 IL4P05112 153 aa16.99■□□□□ 0.31
PKP3-206ENST00000528036 SPP1P10451 314 aa16.99■□□□□ 0.31
PKP3-206ENST00000528036 UBE2MP61081 183 aaKnown RBP16.99■□□□□ 0.31
PKP3-206ENST00000528036 RAB11AP62491 216 aa16.99■□□□□ 0.31
PKP3-206ENST00000528036 RPP30P78346 268 aaKnown RBP16.99■□□□□ 0.31
PKP3-206ENST00000528036 ZNF124Q15973 351 aa16.99■□□□□ 0.31
PKP3-206ENST00000528036 CCDC190Q86UF4 302 aa16.99■□□□□ 0.31
PKP3-206ENST00000528036 CIB3Q96Q77 187 aaPredicted RBP16.99■□□□□ 0.31
PKP3-206ENST00000528036 C11orf68Q9H3H3 251 aaKnown RBP16.99■□□□□ 0.31
PKP3-206ENST00000528036 NXPH3O95157 252 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 RBMS2Q15434 407 aaKnown RBP16.98■□□□□ 0.31
PKP3-206ENST00000528036 LEMD1Q68G75 181 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 OR51G1Q8NGK1 321 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 OR11H2Q8NH07 326 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 DCANP1Q8TF63 244 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 GLMPQ8WWB7 406 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 SLC35E1Q96K37 410 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 PRR13Q9NZ81 148 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 LYSTQ99698 3801 aa16.98■□□□□ 0.31
PKP3-206ENST00000528036 PITX3O75364 302 aa16.97■□□□□ 0.31
PKP3-206ENST00000528036 VAMP1P23763 118 aa16.97■□□□□ 0.31
PKP3-206ENST00000528036 SNRPD3P62318 126 aaKnown RBP16.97■□□□□ 0.31
PKP3-206ENST00000528036 PMS2P11Q13670 270 aa16.97■□□□□ 0.31
PKP3-206ENST00000528036 OR8G2PQ6IF36 304 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms