RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 SLC17A3O00476 420 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 COX7A1P24310 79 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 JOSD1Q15040 202 aaPredicted RBP12.28□□□□□ -0.44
USH1C-207ENST00000527720 TMEM18Q96B42 140 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 C22orf46C9J442 243 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 DLX1P56177 255 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 OR5I1Q13606 314 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
USH1C-207ENST00000527720 TEX22C9J3V5 150 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 IGLV2-8P01709 118 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 IGHV3-48P01763 117 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 PLP1P60201 277 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 CDSNQ15517 529 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 FXYD5Q96DB9 178 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 ONECUT1Q9UBC0 465 aa12.27□□□□□ -0.44
USH1C-207ENST00000527720 PYYP10082 97 aa12.27□□□□□ -0.45
USH1C-207ENST00000527720 COX19Q49B96 90 aa12.27□□□□□ -0.45
USH1C-207ENST00000527720 PRDM13Q9H4Q3 707 aa12.27□□□□□ -0.45
USH1C-207ENST00000527720 M0R1W7 72 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 GBGT1Q8N5D6 347 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 HTR1DP28221 377 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 ADMP35318 185 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 SRSF12Q8WXF0 261 aaKnown RBP12.26□□□□□ -0.45
USH1C-207ENST00000527720 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
USH1C-207ENST00000527720 MOSP00540 346 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 CEACAM3P40198 252 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 MYCNOSP40205 109 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 IBA57Q5T440 356 aaKnown RBP12.25□□□□□ -0.45
USH1C-207ENST00000527720 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 DPM3Q9P2X0 92 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 ABCA4P78363 2273 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 PEX7O00628 323 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 HYPMO75409 117 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 CX3CL1P78423 397 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 OR1L6Q8NGR2 347 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 OR1B1Q8NGR6 318 aa12.25□□□□□ -0.45
USH1C-207ENST00000527720 MT-ND6P03923 174 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 ORM2P19652 201 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
USH1C-207ENST00000527720 PLGLAQ15195 96 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 RUSC1-AS1Q66K80 236 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 WDR73Q6P4I2 378 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 FAM231DQ6ZW35 169 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
USH1C-207ENST00000527720 RNASE7Q9H1E1 156 aaKnown RBP12.24□□□□□ -0.45
USH1C-207ENST00000527720 SPTA1P02549 2419 aa12.24□□□□□ -0.45
USH1C-207ENST00000527720 TIMM23O14925 209 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 GZMBP10144 247 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 OR8I2Q8N0Y5 310 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 SMIM12Q96EX1 92 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 SSBP3Q9BWW4 388 aaPredicted RBP12.23□□□□□ -0.45
USH1C-207ENST00000527720 LOC105371242A0A075B767 164 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 MGST1P10620 155 aaKnown RBP12.23□□□□□ -0.45
USH1C-207ENST00000527720 CBLN1P23435 193 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 PRTN3P24158 256 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
USH1C-207ENST00000527720 ODF3BA8MYP8 253 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 I3L2K1 104 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 PKIAP61925 76 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 ARF6P62330 175 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 C1orf122Q6ZSJ8 110 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 NPBQ8NG41 125 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 CFHR4Q92496 578 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 TPRP12270 2363 aaKnown RBP12.22□□□□□ -0.45
USH1C-207ENST00000527720 FCN1O00602 326 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 NBR2O15453 112 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 NDUFA3O95167 84 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 APELAP0DMC3 54 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 IER3P46695 156 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 TMEM183BQ1AE95 376 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 LDLRAD2Q5SZI1 272 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 CHRDL1Q9BU40 450 aa12.22□□□□□ -0.45
USH1C-207ENST00000527720 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 LY6HO94772 140 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 IGLC1P0CG04 106 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 MMDQ15546 238 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 WNT10AQ9GZT5 417 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
USH1C-207ENST00000527720 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 TSTD3H0UI37 97 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 CNIH1O95406 144 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 ESDP10768 282 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 GP9P14770 177 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 CRISP2P16562 243 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 BTF3P20290 206 aaKnown RBP12.21□□□□□ -0.46
USH1C-207ENST00000527720 GPR6P46095 362 aaPredicted RBP12.21□□□□□ -0.46
USH1C-207ENST00000527720 FXYD3Q14802 87 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms