RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TCF24Q7RTU0 167 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 IL17DQ8TAD2 202 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 C7orf50Q9BRJ6 194 aaKnown RBP15.34■□□□□ 0.05
VPS28-206ENST00000526734 RBKSQ9H477 322 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 IGHV3-49A0A0A0MS15 119 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 KIR2DL5BA0A0G2JN68 375 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 KIR2DL5BA0A0G2JPC4 375 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 UBE2CO00762 179 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 PITX3O75364 302 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 NXPH3O95157 252 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 PPP1R1AQ13522 171 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 KIR2DL5AQ8N109 375 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 KIR2DL5BQ8NHK3 375 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 Q8WTZ3 238 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 TMEM170AQ8WVE7 144 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 ST8SIA2Q92186 375 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 RETNQ9HD89 108 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 UBQLN2Q9UHD9 624 aa15.33■□□□□ 0.04
VPS28-206ENST00000526734 MED6O75586 246 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 NDUFB6O95139 128 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 CRYBB3P26998 211 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 OR10J1P30954 320 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 BAK1Q16611 211 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 CNPY1Q3B7I2 92 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 TIGITQ495A1 244 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 GRAMD2BQ96HH9 432 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 TP53TG1Q9Y2A0 90 aa15.32■□□□□ 0.04
VPS28-206ENST00000526734 IGHV3OR16-13A0A075B7E8 117 aa15.31■□□□□ 0.04
VPS28-206ENST00000526734 IGHV3-74A0A0B4J1X5 117 aa15.31■□□□□ 0.04
VPS28-206ENST00000526734 DFFBO76075 338 aa15.31■□□□□ 0.04
VPS28-206ENST00000526734 Q6ZWC4 215 aa15.31■□□□□ 0.04
VPS28-206ENST00000526734 CIB3Q96Q77 187 aaPredicted RBP15.31■□□□□ 0.04
VPS28-206ENST00000526734 IFNA4P05014 189 aa15.3■□□□□ 0.04
VPS28-206ENST00000526734 GPX4P36969 197 aaPredicted RBP15.3■□□□□ 0.04
VPS28-206ENST00000526734 EIF2B2P49770 351 aaKnown RBP15.3■□□□□ 0.04
VPS28-206ENST00000526734 NPIPB3Q92617 1050 aa15.3■□□□□ 0.04
VPS28-206ENST00000526734 DNASE2O00115 360 aaPredicted RBP15.29■□□□□ 0.04
VPS28-206ENST00000526734 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
VPS28-206ENST00000526734 TFPI2P48307 235 aa15.29■□□□□ 0.04
VPS28-206ENST00000526734 RAB11AP62491 216 aa15.29■□□□□ 0.04
VPS28-206ENST00000526734 RPP30P78346 268 aaKnown RBP15.29■□□□□ 0.04
VPS28-206ENST00000526734 STPG3Q8N7X2 389 aa15.29■□□□□ 0.04
VPS28-206ENST00000526734 ACY3Q96HD9 319 aa15.29■□□□□ 0.04
VPS28-206ENST00000526734 SDHCQ99643 169 aaPredicted RBP15.29■□□□□ 0.04
VPS28-206ENST00000526734 KMT2CQ8NEZ4 4911 aaKnown RBP15.28■□□□□ 0.04
VPS28-206ENST00000526734 TOMM40O96008 361 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 IL7P13232 177 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 NUP62P37198 522 aaPredicted RBP15.28■□□□□ 0.04
VPS28-206ENST00000526734 P2RY1P47900 373 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 RPL11P62913 178 aaKnown RBP15.28■□□□□ 0.04
VPS28-206ENST00000526734 COQ8AQ8NI60 647 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 SLC35E1Q96K37 410 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 MS4A6AQ9H2W1 248 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 MAP6D1Q9H9H5 199 aa15.28■□□□□ 0.04
VPS28-206ENST00000526734 IGKV3-7A0A075B6H7 116 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 C9orf170A2RU37 121 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 HELTA6NFD8 242 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 FABP1P07148 127 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 HNRNPCP07910 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
VPS28-206ENST00000526734 WFDC3Q8IUB2 231 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 GBGT1Q8N5D6 347 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 OVOL2Q9BRP0 275 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 PFDN2Q9UHV9 154 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 U3KQE9 123 aa15.27■□□□□ 0.04
VPS28-206ENST00000526734 SYNGR2O43760 224 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 HOXB5P09067 269 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 RD3LP0DJH9 198 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 AP2S1P53680 142 aaPredicted RBP15.26■□□□□ 0.03
VPS28-206ENST00000526734 GGNBP1Q5YKI7 109 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 LINC00299Q6ZSB3 139 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 LILRB2Q8N423 598 aa15.26■□□□□ 0.03
VPS28-206ENST00000526734 IGHV3-66A0A0C4DH42 116 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 IFNA21P01568 189 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 IL4P05112 153 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 LYG2Q86SG7 212 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 APRG1Q8IVJ8 170 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 RABAC1Q9UI14 185 aa15.25■□□□□ 0.03
VPS28-206ENST00000526734 NBEAL2Q6ZNJ1 2754 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 SPRY2O43597 315 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 OR4E1P0C645 316 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 IAPPP10997 89 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 BTCP35070 178 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 DHRS2Q13268 280 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 OR8G2PQ6IF36 304 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 OR51G1Q8NGK1 321 aa15.24■□□□□ 0.03
VPS28-206ENST00000526734 LINC00854A0A1B0GVQ3 168 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 ZFP92A6NM28 416 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 K7EQG2 157 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 RPL35AP18077 110 aaKnown RBP15.23■□□□□ 0.03
VPS28-206ENST00000526734 GAMTQ14353 236 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 USF2Q15853 346 aaPredicted RBP15.23■□□□□ 0.03
VPS28-206ENST00000526734 C4orf46Q504U0 113 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 ZFAND6Q6FIF0 208 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 C16orf54Q6UWD8 224 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 STXBP6Q8NFX7 210 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 RNF183Q96D59 192 aa15.23■□□□□ 0.03
VPS28-206ENST00000526734 DNAH7Q8WXX0 4024 aa15.22■□□□□ 0.03
VPS28-206ENST00000526734 PSG1P11464 419 aa15.22■□□□□ 0.03
VPS28-206ENST00000526734 DEFB135Q30KP9 77 aa15.22■□□□□ 0.03
VPS28-206ENST00000526734 GLMPQ8WWB7 406 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms