RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 AMMECR1Q9Y4X0 333 aaPredicted RBP9.4□□□□□ -0.9
LINC01001-201ENST00000526704 DPRXA6NFQ7 191 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 PEX7O00628 323 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 KRTDAPP60985 99 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 FAM71F2Q6NXP2 309 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 LYPD2Q6UXB3 125 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 ZNF596Q8TC21 504 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 H1FXQ92522 213 aaKnown RBP9.4□□□□□ -0.9
LINC01001-201ENST00000526704 FXYD5Q96DB9 178 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
LINC01001-201ENST00000526704 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 TMEM178BH3BS89 294 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PMCHP20382 165 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 AMTP48728 403 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 BPIFB3P59826 476 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 SLAQ13239 276 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 FAM231DQ6ZW35 169 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 LINC00311Q8N616 119 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 ST6GALNAC6Q969X2 333 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 SAP30LQ9HAJ7 183 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 WASHC3Q9Y3C0 194 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PPIAL4EA0A075B759 164 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 A0A0G2JNJ9 132 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 A0A1W2PPI3 338 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PPIAL4DF5H284 164 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF253O75346 499 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 REG1AP05451 166 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PPIAL4FP0DN26 164 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 BSPH1Q075Z2 132 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 COTL1Q14019 142 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 RUSC1-AS1Q66K80 236 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
LINC01001-201ENST00000526704 Q9UFV3 132 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 PPIAL4AQ9Y536 164 aa9.39□□□□□ -0.91
LINC01001-201ENST00000526704 DIRC3C9JPN6 131 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 TNFRSF13BO14836 293 aaPredicted RBP9.38□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
LINC01001-201ENST00000526704 APCSP02743 223 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 THBDP07204 575 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 DLX6P56179 175 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 NIT1Q86X76 327 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 C8orf31Q8N9H6 132 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 TMEM186Q96B77 213 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 RITA1Q96K30 269 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 CTSZQ9UBR2 303 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 MALRD1Q5VYJ5 2156 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 ANKRD11Q6UB99 2663 aaPredicted RBP9.38□□□□□ -0.91
LINC01001-201ENST00000526704 C22orf46C9J442 243 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 SLC25A17O43808 307 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 PLAUP00749 431 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 MYCNOSP40205 109 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 SUB1P53999 127 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC01001-201ENST00000526704 GNG5P63218 68 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 SAPCD1Q5SSQ6 148 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF841Q6ZN19 808 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF292O60281 2723 aa9.38□□□□□ -0.91
LINC01001-201ENST00000526704 C16orf97H3BN30 126 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 MOSP00540 346 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 LOXP28300 417 aaPredicted RBP9.37□□□□□ -0.91
LINC01001-201ENST00000526704 CTRLP40313 264 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF137PP52743 207 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 NUDT10Q8NFP7 164 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 C18orf32Q8TCD1 76 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 NUDT11Q96G61 164 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 GRAMD2BQ96HH9 432 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
LINC01001-201ENST00000526704 SIAH2O43255 324 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 NDUFB3O43676 98 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 COL5A1-AS1Q5SY13 56 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 CCL17Q92583 94 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 KALRNO60229 2985 aa9.37□□□□□ -0.91
LINC01001-201ENST00000526704 ATMQ13315 3056 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 IGLC7A0M8Q6 106 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 TBR1Q16650 682 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 VMA21Q3ZAQ7 101 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 LRRC10Q5BKY1 277 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 CORTO00230 105 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 TCF21O43680 179 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 MFAP2P55001 183 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 PRR27Q6MZM9 219 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
LINC01001-201ENST00000526704 MAP1BP46821 2468 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms