RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 A0A1W2PS18 150 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 IFNA10P01566 189 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 SLC25A4P12235 298 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 NPY1RP25929 384 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 TNFRSF9Q07011 255 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 PRSS54Q6PEW0 395 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 NARS2Q96I59 477 aaKnown RBP13.72□□□□□ -0.21
CAPN1-203ENST00000525013 MAP6D1Q9H9H5 199 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 RABAC1Q9UI14 185 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
CAPN1-203ENST00000525013 OR10J1P30954 320 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 ETFRF1Q6IPR1 90 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 OR1S2Q8NGQ3 325 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 OR1S1Q8NH92 325 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 TMEM170AQ8WVE7 144 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 RBKSQ9H477 322 aa13.71□□□□□ -0.21
CAPN1-203ENST00000525013 AGRNO00468 2067 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 VAMP1P23763 118 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 CRYBB3P26998 211 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 TMEM128Q5BJH2 165 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 CCDC190Q86UF4 302 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 Q8WTZ3 238 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
CAPN1-203ENST00000525013 HSPB7Q9UBY9 170 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 U3KQ87 197 aa13.7□□□□□ -0.22
CAPN1-203ENST00000525013 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 A0A0J9YWU9 116 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 P2RY1P47900 373 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 NPIPB3Q92617 1050 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 RNF183Q96D59 192 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 CSTL1Q9H114 145 aa13.69□□□□□ -0.22
CAPN1-203ENST00000525013 MPTX1A8MV57 137 aa13.68□□□□□ -0.22
CAPN1-203ENST00000525013 IFNA4P05014 189 aa13.68□□□□□ -0.22
CAPN1-203ENST00000525013 DEFB131AP59861 70 aa13.68□□□□□ -0.22
CAPN1-203ENST00000525013 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-203ENST00000525013 RBMS2Q15434 407 aaKnown RBP13.68□□□□□ -0.22
CAPN1-203ENST00000525013 LEMD1Q68G75 181 aa13.68□□□□□ -0.22
CAPN1-203ENST00000525013 LYG2Q86SG7 212 aa13.68□□□□□ -0.22
CAPN1-203ENST00000525013 SLC25A21Q9BQT8 299 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-203ENST00000525013 TRAV2A0A0B4J234 112 aa13.67□□□□□ -0.22
CAPN1-203ENST00000525013 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-203ENST00000525013 FAM24BQ8N5W8 94 aa13.67□□□□□ -0.22
CAPN1-203ENST00000525013 DEDD2Q8WXF8 326 aa13.67□□□□□ -0.22
CAPN1-203ENST00000525013 SACSQ9NZJ4 4579 aa13.67□□□□□ -0.22
CAPN1-203ENST00000525013 DUXBA0A1W2PPF3 345 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 CXorf65A6NEN9 183 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 IL4P05112 153 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 HNRNPCP07910 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAPN1-203ENST00000525013 INPP1P49441 399 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 RYR2Q92736 4967 aa13.66□□□□□ -0.22
CAPN1-203ENST00000525013 JTBO76095 146 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 RD3LP0DJH9 198 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
CAPN1-203ENST00000525013 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 CENPSQ8N2Z9 138 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 SRRQ9GZT4 340 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 U3KQE9 123 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 LYSTQ99698 3801 aa13.65□□□□□ -0.22
CAPN1-203ENST00000525013 HELTA6NFD8 242 aa13.64□□□□□ -0.23
CAPN1-203ENST00000525013 K7EQG2 157 aa13.64□□□□□ -0.23
CAPN1-203ENST00000525013 SFT2D2O95562 160 aa13.64□□□□□ -0.23
CAPN1-203ENST00000525013 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-203ENST00000525013 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
CAPN1-203ENST00000525013 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
CAPN1-203ENST00000525013 STHQ8IWL8 128 aa13.64□□□□□ -0.23
CAPN1-203ENST00000525013 PAIP2BQ9ULR5 123 aaKnown RBP13.64□□□□□ -0.23
CAPN1-203ENST00000525013 PITX3O75364 302 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 TOMM40O96008 361 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 CA1P00915 261 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-203ENST00000525013 HOXB5P09067 269 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 ZNF688P0C7X2 276 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 IAPPP10997 89 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 PSG1P11464 419 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 USF2Q15853 346 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-203ENST00000525013 C16orf54Q6UWD8 224 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 TMEM217Q8N7C4 229 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 RARRES2Q99969 163 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
CAPN1-203ENST00000525013 LINC00854A0A1B0GVQ3 168 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 ZFP92A6NM28 416 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 GPX4P36969 197 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-203ENST00000525013 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-203ENST00000525013 RAB11AP62491 216 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 DHRS2Q13268 280 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 OR51G1Q8NGK1 321 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 DCANP1Q8TF63 244 aa13.62□□□□□ -0.23
CAPN1-203ENST00000525013 MAGT1Q9H0U3 335 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms