RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 GBGT1Q8N5D6 347 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 OR1L6Q8NGR2 347 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 OR4X1Q8NH49 305 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 DYNLRB2Q8TF09 96 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 CHAC2Q8WUX2 184 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 PPP1R1CQ8WVI7 109 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 SLC35E1Q96K37 410 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 SMIM8Q96KF7 97 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 CIB3Q96Q77 187 aaPredicted RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 RNF126Q9BV68 326 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 PBDC1Q9BVG4 233 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 ELOVL1Q9BW60 279 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 SMIM3Q9BZL3 60 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 C11orf1Q9H5F2 150 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 AURKAIP1Q9NWT8 199 aaPredicted RBP3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 DOK5Q9P104 306 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 MBD2Q9UBB5 411 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 MLXQ9UH92 298 aa3.49□□□□□ -1.85
CHMP4A-202ENST00000524955 IGKV1D-37A0A075B6S9 117 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TRAV14DV4A0A0A6YYC5 116 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 PIGBOS1A0A0B4J2F0 54 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 A0A1B0GVG6 124 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TSC22D2O75157 780 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 DEDDO75618 318 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 MPC2O95563 127 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 IL4P05112 153 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 SNRPCP09234 159 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 PSG1P11464 419 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 SLC25A4P12235 298 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 LYZP61626 148 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 RPP30P78346 268 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 EWSR1Q01844 656 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 RELQ04864 619 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 SLC38A11Q08AI6 406 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 CLINT1Q14677 625 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 USF2Q15853 346 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 GUCA2BQ16661 112 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 CD300EQ496F6 205 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 DEFB121Q5J5C9 76 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 ETFRF1Q6IPR1 90 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 SPSB3Q6PJ21 355 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM14EPQ6UXP3 125 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 REC114Q7Z4M0 266 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 GPHB5Q86YW7 130 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 WFDC3Q8IUB2 231 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM61Q8N0U2 210 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 LILRB2Q8N423 598 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM252Q8N6L7 170 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 OR10P1Q8NGE3 313 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 OR51G1Q8NGK1 321 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 THAP6Q8TBB0 222 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM190Q8WZ59 177 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 ST8SIA2Q92186 375 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 RAB40CQ96S21 281 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 TXN2Q99757 166 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF436Q9C0F3 470 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 WFDC10AQ9H1F0 79 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 ZFAND3Q9H8U3 227 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 PEMTQ9UBM1 199 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 UFC1Q9Y3C8 167 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 RFNGQ9Y644 331 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 VWFP04275 2813 aa3.48□□□□□ -1.85
CHMP4A-202ENST00000524955 FXYD6-FXYD2A0A087WZ82 144 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 IGHV7-4-1A0A0J9YVY3 117 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 UBE2L5PA0A1B0GUS4 154 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF785A8K8V0 405 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 K7EIL1 84 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 LGALS9O00182 355 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 NDUFA4O00483 81 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 CHEK1O14757 476 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 EIF3GO75821 320 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 IGLV1-51P01701 117 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 RLN2P04090 185 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 CD7P09564 240 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 RD3LP0DJH9 198 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 GP9P14770 177 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 ORM2P19652 201 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 PVALBP20472 110 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 NPPCP23582 126 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 GPX4P36969 197 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 AP2S1P53680 142 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 TAS2R30P59541 319 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 RPL11P62913 178 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 DEFB114Q30KQ6 69 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 LEMD1Q68G75 181 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 ZNF600Q6ZNG1 722 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 NOXA1Q86UR1 476 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 TMEM116Q8NCL8 245 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 OR1S2Q8NGQ3 325 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 MRAPQ8TCY5 172 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 Q8WTZ3 238 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 RNF2Q99496 336 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 MGST2Q99735 147 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 MCRIP2Q9BUT9 160 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 RHPN1-AS1Q9BWJ2 59 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 NMES1Q9C002 83 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 WFDC1Q9HC57 220 aa3.47□□□□□ -1.85
CHMP4A-202ENST00000524955 DAZ1Q9NQZ3 744 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms