RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 IGKV1-17P01599 117 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 SLC25A4P12235 298 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 CRYBB3P26998 211 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 P2RY1P47900 373 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 RND2P52198 227 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 STHQ8IWL8 128 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 OR1S2Q8NGQ3 325 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 CACFD1Q9UGQ2 172 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 SULT1A3P0DMM9 295 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 SULT1A4P0DMN0 295 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 NPY1RP25929 384 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 OR10J1P30954 320 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
CLN8-205ENST00000520991 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 Q8WTZ3 238 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 PRR13Q9NZ81 148 aa11.61□□□□□ -0.55
CLN8-205ENST00000520991 FABP12A6NFH5 140 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 IGLC1P0CG04 106 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 AKR1C4P17516 323 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 TMEM187Q14656 261 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
CLN8-205ENST00000520991 H3BMQ9 156 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 K7EQG2 157 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 TNFSF8P32971 234 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 NMSQ5H8A3 153 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 MCFD2Q8NI22 146 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
CLN8-205ENST00000520991 ACY3Q96HD9 319 aa11.6□□□□□ -0.55
CLN8-205ENST00000520991 C11orf68Q9H3H3 251 aaKnown RBP11.6□□□□□ -0.55
CLN8-205ENST00000520991 HELTA6NFD8 242 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 IFNA10P01566 189 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLN8-205ENST00000520991 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 ANXA3P12429 323 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 CCR6P51684 374 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
CLN8-205ENST00000520991 SMCO1Q147U7 214 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 RBMS2Q15434 407 aaKnown RBP11.59□□□□□ -0.55
CLN8-205ENST00000520991 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 NPIPB3Q92617 1050 aa11.59□□□□□ -0.55
CLN8-205ENST00000520991 BIRC6Q9NR09 4857 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 IL4P05112 153 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 FAUP35544 74 aaKnown RBP11.58□□□□□ -0.56
CLN8-205ENST00000520991 SRPXP78539 464 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 DHRS2Q13268 280 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 LGI3Q8N145 548 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 C11orf45Q8TAV5 145 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 DTD1Q8TEA8 209 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 MFFQ9GZY8 342 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 HSPB7Q9UBY9 170 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 FBXL17Q9UF56 701 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 U3KQ87 197 aa11.58□□□□□ -0.56
CLN8-205ENST00000520991 KNCNA6PVL3 124 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 RD3LP0DJH9 198 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
CLN8-205ENST00000520991 NANOS2P60321 138 aaKnown RBP11.57□□□□□ -0.56
CLN8-205ENST00000520991 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
CLN8-205ENST00000520991 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
CLN8-205ENST00000520991 SOSTQ9BQB4 213 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 RBKSQ9H477 322 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 U3KQE9 123 aa11.57□□□□□ -0.56
CLN8-205ENST00000520991 PIGBOS1A0A0B4J2F0 54 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 DEFB4AO15263 64 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 TOMM40O96008 361 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 IFNA4P05014 189 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 SPP1P10451 314 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 AP3S2P59780 193 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 USF2Q15853 346 aaPredicted RBP11.56□□□□□ -0.56
CLN8-205ENST00000520991 PYDC2Q56P42 97 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 TMEM41BQ5BJD5 291 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
CLN8-205ENST00000520991 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
CLN8-205ENST00000520991 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
CLN8-205ENST00000520991 CCDC160A6NGH7 325 aa11.54□□□□□ -0.56
CLN8-205ENST00000520991 PSG1P11464 419 aa11.54□□□□□ -0.56
CLN8-205ENST00000520991 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
CLN8-205ENST00000520991 KLF9Q13886 244 aaPredicted RBP11.54□□□□□ -0.56
CLN8-205ENST00000520991 TOMM5Q8N4H5 51 aa11.54□□□□□ -0.56
CLN8-205ENST00000520991 TRIM63Q969Q1 353 aa11.54□□□□□ -0.56
CLN8-205ENST00000520991 ZFP92A6NM28 416 aa11.53□□□□□ -0.56
CLN8-205ENST00000520991 C4BPBP20851 252 aa11.53□□□□□ -0.56
CLN8-205ENST00000520991 VAMP1P23763 118 aa11.53□□□□□ -0.56
CLN8-205ENST00000520991 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
CLN8-205ENST00000520991 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms