RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 FGF2P09038 288 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 C8orf88P0DMB2 117 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 GNRHRP30968 328 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 FXYD4P59646 89 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 CATR1Q13166 79 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 DHRS11Q6UWP2 260 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF502Q8TBZ5 544 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 CD300LFQ8TDQ1 290 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 CXorf58Q96LI9 332 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 SEC22CQ9BRL7 303 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 PLEKHA2Q9HB19 425 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 GPN1Q9HCN4 374 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 EHFQ9NZC4 300 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 FLVCR2Q9UPI3 526 aa6.93□□□□□ -1.3
CTNNA1-221ENST00000520339 TRAV25A0A0B4J276 109 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 S1PR2O95136 353 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 IL5P05113 134 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 ANXA7P20073 488 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 RRAS2P62070 204 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 AARDQ4LEZ3 155 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 CLLU1Q5K131 121 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 SLC16A13Q7RTY0 426 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 EIF4E3Q8N5X7 224 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 OR13C8Q8NGS7 320 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 OR51H1Q8NH63 302 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 SCGB3A2Q96PL1 93 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 QTRT1Q9BXR0 403 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF436Q9C0F3 470 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 COMMD5Q9GZQ3 224 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 MED28Q9H204 178 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 OR51M1Q9H341 326 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 BIN3Q9NQY0 253 aa6.92□□□□□ -1.3
CTNNA1-221ENST00000520339 TEX50A0A1B0GTY4 177 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 SNRPGP15A8MWD9 76 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 SSNA1O43805 119 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 C1QBP02746 253 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 OR13C7P0DN81 318 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 RPA2P15927 270 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 GPR183P32249 361 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 ELLP55199 621 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 HERV-K104P61576 105 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 ANKRD55Q3KP44 614 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF585BQ52M93 769 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 AADACL3Q5VUY0 350 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 BTNL8Q6UX41 500 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 TMED4Q7Z7H5 227 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 OR10W1Q8NGF6 305 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 OR52B4Q8NGK2 314 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 OR1L8Q8NGR8 309 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 VN1R17PQ8TDU5 208 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 MOB3AQ96BX8 217 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 NDUFA4L2Q9NRX3 87 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 COMMD9Q9P000 198 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 THYN1Q9P016 225 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 MRPL27Q9P0M9 148 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 HYDINQ4G0P3 5121 aa6.91□□□□□ -1.3
CTNNA1-221ENST00000520339 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 MPTX1A8MV57 137 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 F2RP25116 425 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 PCP4P48539 62 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 MFAP2P55001 183 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 UBE2MP61081 183 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 SURF2Q15527 256 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 SLC25A24Q6NUK1 477 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 HSD17B13Q7Z5P4 300 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 LHFPL1Q86WI0 220 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 DMBX1Q8NFW5 382 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 TERB2Q8NHR7 220 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 TMEM190Q8WZ59 177 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 OVOL2Q9BRP0 275 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 GGTLC1Q9BX51 225 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 C5orf66Q9H5L9 145 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 UFC1Q9Y3C8 167 aa6.9□□□□□ -1.3
CTNNA1-221ENST00000520339 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.31
CTNNA1-221ENST00000520339 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 CYB5BO43169 146 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 TGOLN2O43493 480 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 SPRY2O43597 315 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 SERPINE2P07093 398 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 OR4E1P0C645 316 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 SULT1A3P0DMM9 295 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 SULT1A4P0DMN0 295 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 PGAM2P15259 253 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 LPAR6P43657 344 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 ERVK-16P61578 105 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 FCN2Q15485 313 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 SAPCD1Q5SSQ6 148 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 RBPMS2Q6ZRY4 209 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 RNASE11Q8TAA1 199 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms