RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
CSMD1-205ENST00000519623 MRPS26Q9BYN8 205 aaKnown RBP9.06□□□□□ -0.96
CSMD1-205ENST00000519623 FRAS1Q86XX4 4008 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 RPS10-NUDT3A0A1W2PQS6 291 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 NXPH3O95157 252 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 AKAIN1P0CW23 69 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 SLC25A4P12235 298 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-205ENST00000519623 TMEM268Q5VZI3 342 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 OR51S1Q8NGJ8 323 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 OR1S2Q8NGQ3 325 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 DIRAS2Q96HU8 199 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 MFFQ9GZY8 342 aa9.05□□□□□ -0.96
CSMD1-205ENST00000519623 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 CEBPZOSA8MTT3 80 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 SCGB2A1O75556 95 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 IFNA4P05014 189 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 OR10J1P30954 320 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RND2P52198 227 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 IL18Q14116 193 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
CSMD1-205ENST00000519623 NMSQ5H8A3 153 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 C16orf54Q6UWD8 224 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 Q8NAQ8 132 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 SLC24A4Q8NFF2 622 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 DYNC2LI1Q8TCX1 351 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 Q8WTZ3 238 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 PRRT1Q99946 306 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RABL2AQ9UBK7 228 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-205ENST00000519623 FBXL17Q9UF56 701 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 RABL2BQ9UNT1 228 aa9.04□□□□□ -0.96
CSMD1-205ENST00000519623 ANKRD20A5PA0PJZ0 165 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 GSTZ1O43708 216 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-205ENST00000519623 DEDDO75618 318 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 HNRNPCP07910 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
CSMD1-205ENST00000519623 MORN3Q6PF18 240 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-205ENST00000519623 CLVS1Q8IUQ0 354 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-205ENST00000519623 CSNK1G2-AS1Q8NCQ2 148 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 NARS2Q96I59 477 aaKnown RBP9.03□□□□□ -0.96
CSMD1-205ENST00000519623 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 SOSTQ9BQB4 213 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 KCNIP3Q9Y2W7 256 aa9.03□□□□□ -0.96
CSMD1-205ENST00000519623 HELTA6NFD8 242 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 ZNF705EA8MWA4 302 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-205ENST00000519623 SULT1A3P0DMM9 295 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 SULT1A4P0DMN0 295 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 SPP1P10451 314 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 C4BPBP20851 252 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 NPY1RP25929 384 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 AP2S1P53680 142 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-205ENST00000519623 SUPT4H1P63272 117 aaKnown RBP9.02□□□□□ -0.97
CSMD1-205ENST00000519623 DHRS2Q13268 280 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-205ENST00000519623 TMEM41BQ5BJD5 291 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 ACTL10Q5JWF8 245 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 ETFRF1Q6IPR1 90 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 C2CD4CQ8TF44 421 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 RAB2BQ8WUD1 216 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
CSMD1-205ENST00000519623 CACFD1Q9UGQ2 172 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 X6R8D5 127 aa9.02□□□□□ -0.97
CSMD1-205ENST00000519623 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 DNAH10Q8IVF4 4471 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 IGHV4-28A0A0C4DH34 117 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 BUB3O43684 328 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 IL4P05112 153 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 RD3LP0DJH9 198 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 MIFP14174 115 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
CSMD1-205ENST00000519623 TMBIM6P55061 237 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 PRR20EP86478 221 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 PRR20CP86479 221 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 PRR20DP86480 221 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 PRR20BP86481 221 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 PRR20AP86496 221 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 LYZL2Q7Z4W2 148 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 ACY3Q96HD9 319 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 HRH4Q9H3N8 390 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 HSPB7Q9UBY9 170 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 SCP2D1Q9UJQ7 156 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 U3KQ87 197 aa9.01□□□□□ -0.97
CSMD1-205ENST00000519623 ELOA3CA0A087WX78 387 aaPredicted RBP9□□□□□ -0.97
CSMD1-205ENST00000519623 A0A0B4J2A0 478 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 TOMM40O96008 361 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 IFNA10P01566 189 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 PSG1P11464 419 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 AKR1C4P17516 323 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 TNFSF8P32971 234 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 CCR6P51684 374 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 TCTAP57738 103 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 PSMG4Q5JS54 123 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms