RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 GPR146Q96CH1 333 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 PPP1R2P1Q96PQ5 205 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 TMEM14CQ9P0S9 112 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 SBF1O95248 1867 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 HIVEP3Q5T1R4 2406 aa-0.36□□□□□ -2.47
PCM1-208ENST00000518877 FREM3P0C091 2139 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 UNC79Q9P2D8 2635 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 IGHV1-58A0A0C4DH39 117 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 DPRXA6NFQ7 191 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 M0QZ92 97 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 OR2B3O76000 313 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 CASQ1P31415 396 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 C12orf74Q32Q52 190 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 BRMS1LQ5PSV4 323 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 FAM74A1Q5RGS3 127 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 PLEKHG7Q6ZR37 379 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 TOMM6Q96B49 74 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 CHMP4BQ9H444 224 aaKnown RBP-0.37□□□□□ -2.47
PCM1-208ENST00000518877 PSTPIP2Q9H939 334 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 OSTCQ9NRP0 149 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 SLC39A9Q9NUM3 307 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 ECM29Q5VYK3 1845 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 TAF1LQ8IZX4 1826 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 PIK3R4Q99570 1358 aa-0.37□□□□□ -2.47
PCM1-208ENST00000518877 ANK2Q01484 3957 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 ABCA12Q86UK0 2595 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SPTBP11277 2137 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 EXOC1LA0A1B0GW35 172 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SMIM9A6NGZ8 99 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 NUPR1O60356 82 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 PROSCO94903 275 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 ZNF682O95780 498 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 HLA-DRB1P01911 266 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 UCHL3P15374 230 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 MAGEA2P43356 314 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 ESRGQ1W209 222 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 LINC01554Q52M75 96 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 C6orf52Q5T4I8 152 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SPINK6Q6UWN8 80 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 LINC00575Q6W349 94 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 PLPP5Q8NEB5 264 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 PIGXQ8TBF5 258 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 WFDC5Q8TCV5 224 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SLC35B4Q969S0 331 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 ADAT3Q96EY9 351 aaPredicted RBP-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SLC35A3Q9Y2D2 325 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 MYH10P35580 1976 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 SCN8AQ9UQD0 1980 aa-0.38□□□□□ -2.47
PCM1-208ENST00000518877 WRNQ14191 1432 aaPredicted RBP eCLIP-0.38□□□□□ -2.47
PCM1-208ENST00000518877 MYL12AP19105 171 aa-0.39□□□□□ -2.47
PCM1-208ENST00000518877 ZNF137PP52743 207 aa-0.39□□□□□ -2.47
PCM1-208ENST00000518877 SNRPD2P62316 118 aaKnown RBP-0.39□□□□□ -2.47
PCM1-208ENST00000518877 C4orf3Q8WVX3 66 aa-0.39□□□□□ -2.47
PCM1-208ENST00000518877 COMMD5Q9GZQ3 224 aa-0.39□□□□□ -2.47
PCM1-208ENST00000518877 UTP11Q9Y3A2 253 aaKnown RBP-0.39□□□□□ -2.47
PCM1-208ENST00000518877 ZGRF1Q86YA3 2104 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 FLNCQ14315 2725 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 NUPR2A6NF83 97 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 B4DSR2 109 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 OR5G3P0C626 314 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 OR4E1P0C645 316 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 HIST1H1TP22492 207 aaPredicted RBP-0.4□□□□□ -2.47
PCM1-208ENST00000518877 KDELR1P24390 212 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 RPL5P46777 297 aaKnown RBP-0.4□□□□□ -2.47
PCM1-208ENST00000518877 FOXA3P55318 350 aaPredicted RBP-0.4□□□□□ -2.47
PCM1-208ENST00000518877 KRTAP6-1Q3LI64 71 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 CD200R1LQ6Q8B3 271 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 GLIPR1L1Q6UWM5 242 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 LINC00301Q8NCQ3 95 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 C6orf62Q9GZU0 229 aaPredicted RBP-0.4□□□□□ -2.47
PCM1-208ENST00000518877 DCSTAMPQ9H295 470 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 C14orf105Q9NVL8 296 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 MYO3BQ8WXR4 1341 aa-0.4□□□□□ -2.47
PCM1-208ENST00000518877 A0A1B0GV50 99 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 TCRBV4S1A1TA0A5B7 111 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 GADD45GO95257 159 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 SPINT3P49223 89 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 MED21Q13503 144 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 HIST2H3PS2Q5TEC6 136 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 ANKRD29Q8N6D5 301 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 ITFG2Q969R8 447 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 LINC00052Q96N35 136 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 TSPAN32Q96QS1 320 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 UCK1Q9HA47 277 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 BCL2L10Q9HD36 194 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 FGFR1OP2Q9NVK5 253 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 TNFSF18Q9UNG2 199 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 TMEM56-RWDD3S4R434 201 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 MYH7BA7E2Y1 1941 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 POLQO75417 2590 aa-0.41□□□□□ -2.48
PCM1-208ENST00000518877 ROBO3Q96MS0 1386 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 SIP14410 1827 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 AHSA1O95433 338 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 DHFRP00374 187 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 IFNA10P01566 189 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 C20orf196Q8IYI0 205 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 ST6GALNAC3Q8NDV1 305 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 ATP6V1G3Q96LB4 118 aa-0.42□□□□□ -2.48
PCM1-208ENST00000518877 PRTFDC1Q9NRG1 225 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms