RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 TIGITQ495A1 244 aa14.53□□□□□ -0.08
LMNA-225ENST00000515824 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
LMNA-225ENST00000515824 WDR12Q9GZL7 423 aaKnown RBP14.53□□□□□ -0.08
LMNA-225ENST00000515824 ZFAND3Q9H8U3 227 aa14.53□□□□□ -0.08
LMNA-225ENST00000515824 IGHV3-49A0A0A0MS15 119 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 IGKV1-17P01599 117 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 IGLC1P0CG04 106 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 NPPCP23582 126 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 OR10J1P30954 320 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 ZNF846Q147U1 533 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 MZT2BQ6NZ67 158 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 Q8WTZ3 238 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 NPIPB3Q92617 1050 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 ACY3Q96HD9 319 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 RNF2Q99496 336 aa14.52□□□□□ -0.09
LMNA-225ENST00000515824 TRAV6A0A075B6T7 132 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 IGHV3OR16-13A0A075B7E8 117 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 IGHV3-74A0A0B4J1X5 117 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 FAM240BA0A1B0GVZ2 78 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 OR4C46A6NHA9 309 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 CD5P06127 495 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 GPX4P36969 197 aaPredicted RBP14.51□□□□□ -0.09
LMNA-225ENST00000515824 MITD1Q8WV92 249 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 WWC2-AS2Q96NR7 200 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 METTL26Q96S19 204 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 MAGT1Q9H0U3 335 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 TMEM231Q9H6L2 316 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 SRD5A3Q9H8P0 318 aa14.51□□□□□ -0.09
LMNA-225ENST00000515824 PAIP2BQ9ULR5 123 aaKnown RBP14.51□□□□□ -0.09
LMNA-225ENST00000515824 A0A1W2PS18 150 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 WRBO00258 174 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 YPEL3P61236 119 aaPredicted RBP14.5□□□□□ -0.09
LMNA-225ENST00000515824 HAGHQ16775 308 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 TM2D3Q9BRN9 247 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 WFDC10AQ9H1F0 79 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 VSIRQ9H7M9 311 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 NUDT15Q9NV35 164 aa14.5□□□□□ -0.09
LMNA-225ENST00000515824 MPTX1A8MV57 137 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 H2AFB2P0C5Z0 115 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 NKX2-1P43699 371 aaPredicted RBP14.49□□□□□ -0.09
LMNA-225ENST00000515824 ID3Q02535 119 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 LINC00322Q6ZN03 302 aaPredicted RBP14.49□□□□□ -0.09
LMNA-225ENST00000515824 ST8SIA2Q92186 375 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 NARS2Q96I59 477 aaKnown RBP14.49□□□□□ -0.09
LMNA-225ENST00000515824 SLC35E1Q96K37 410 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 RCHY1Q96PM5 261 aa14.49□□□□□ -0.09
LMNA-225ENST00000515824 APOHP02749 345 aaPredicted RBP14.48□□□□□ -0.09
LMNA-225ENST00000515824 PAFAH1B2P68402 229 aa14.48□□□□□ -0.09
LMNA-225ENST00000515824 ASAH1Q13510 395 aa14.48□□□□□ -0.09
LMNA-225ENST00000515824 FAM90A2PQ658T7 463 aa14.48□□□□□ -0.09
LMNA-225ENST00000515824 TCF24Q7RTU0 167 aa14.48□□□□□ -0.09
LMNA-225ENST00000515824 TBC1D24Q9ULP9 559 aa14.48□□□□□ -0.09
LMNA-225ENST00000515824 IGKV3-7A0A075B6H7 116 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 IGHV3-66A0A0C4DH42 116 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 RBMY1BA6NDE4 496 aaKnown RBP14.47□□□□□ -0.09
LMNA-225ENST00000515824 RBMY1EA6NEQ0 496 aaKnown RBP14.47□□□□□ -0.09
LMNA-225ENST00000515824 UPK1BO75841 260 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 RBMY1DP0C7P1 496 aaKnown RBP14.47□□□□□ -0.09
LMNA-225ENST00000515824 RD3LP0DJH9 198 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 CRYBB3P26998 211 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 POLR2GP62487 172 aaKnown RBP eCLIP14.47□□□□□ -0.09
LMNA-225ENST00000515824 GAMTQ14353 236 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 SPANXN5Q5MJ07 72 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 OR4D5Q8NGN0 318 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 SPATA25Q9BR10 227 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 UBQLN2Q9UHD9 624 aa14.47□□□□□ -0.09
LMNA-225ENST00000515824 ZFP92A6NM28 416 aa14.46□□□□□ -0.09
LMNA-225ENST00000515824 TOMM40O96008 361 aa14.46□□□□□ -0.09
LMNA-225ENST00000515824 CMC4P56277 68 aaPredicted RBP14.46□□□□□ -0.09
LMNA-225ENST00000515824 RPL11P62913 178 aaKnown RBP14.46□□□□□ -0.09
LMNA-225ENST00000515824 IAH1Q2TAA2 248 aaPredicted RBP14.46□□□□□ -0.09
LMNA-225ENST00000515824 LILRB2Q8N423 598 aa14.46□□□□□ -0.09
LMNA-225ENST00000515824 ZNF431Q8TF32 576 aaPredicted RBP14.46□□□□□ -0.09
LMNA-225ENST00000515824 GSKIPQ9P0R6 139 aa14.46□□□□□ -0.09
LMNA-225ENST00000515824 STRAPQ9Y3F4 350 aaKnown RBP14.46□□□□□ -0.09
LMNA-225ENST00000515824 DFFBO76075 338 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 TFPI2P48307 235 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 GBGT1Q8N5D6 347 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 GRAMD2BQ96HH9 432 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 FAM110AQ9BQ89 295 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 PSENENQ9NZ42 101 aa14.45□□□□□ -0.1
LMNA-225ENST00000515824 LOC102724200A0A096LPH7 203 aaPredicted RBP14.44□□□□□ -0.1
LMNA-225ENST00000515824 H3BP45 60 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 DNASE2O00115 360 aaPredicted RBP14.44□□□□□ -0.1
LMNA-225ENST00000515824 SCGB1D2O95969 90 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 IL4P05112 153 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 FABP1P07148 127 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 HNRNPCP07910 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
LMNA-225ENST00000515824 PSG1P11464 419 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 ZBTB8BQ8NAP8 495 aaPredicted RBP14.44□□□□□ -0.1
LMNA-225ENST00000515824 OR51G1Q8NGK1 321 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 ENKURQ8TC29 256 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 SEC22CQ9BRL7 303 aa14.44□□□□□ -0.1
LMNA-225ENST00000515824 SSSCA1O60232 199 aa14.43□□□□□ -0.1
LMNA-225ENST00000515824 P2RY1P47900 373 aa14.43□□□□□ -0.1
LMNA-225ENST00000515824 ODF3L2Q3SX64 289 aa14.43□□□□□ -0.1
LMNA-225ENST00000515824 WFDC3Q8IUB2 231 aa14.43□□□□□ -0.1
LMNA-225ENST00000515824 C12orf45Q8N5I9 185 aaPredicted RBP14.43□□□□□ -0.1
LMNA-225ENST00000515824 SMIM8Q96KF7 97 aa14.43□□□□□ -0.1
LMNA-225ENST00000515824 GGTLC1Q9BX51 225 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms