RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 KIR2DL5AQ8N109 375 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 GBGT1Q8N5D6 347 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 KIR2DL5BQ8NHK3 375 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 IL17DQ8TAD2 202 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 U3KQ87 197 aa17.05■□□□□ 0.32
CLDND1-230ENST00000514537 UBE2CO00762 179 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 IGLC1P0CG04 106 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 CRYBB3P26998 211 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 RND2P52198 227 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 SPANXN2Q5MJ10 180 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 OR1S2Q8NGQ3 325 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 METTL26Q96S19 204 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 SRRQ9GZT4 340 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 RBKSQ9H477 322 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 TMEM231Q9H6L2 316 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 TP53TG1Q9Y2A0 90 aa17.04■□□□□ 0.32
CLDND1-230ENST00000514537 DUXBA0A1W2PPF3 345 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 A0A1W2PS18 150 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 ETFRF1Q6IPR1 90 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 LRTM2Q8N967 370 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 DTD1Q8TEA8 209 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 LYSTQ99698 3801 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 MS4A6AQ9H2W1 248 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 MAP6D1Q9H9H5 199 aa17.03■□□□□ 0.32
CLDND1-230ENST00000514537 TRAV2A0A0B4J234 112 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 PITX3O75364 302 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 IFNA10P01566 189 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 RPL35AP18077 110 aaKnown RBP17.02■□□□□ 0.32
CLDND1-230ENST00000514537 OR10J1P30954 320 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 YPEL3P61236 119 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-230ENST00000514537 ZNF124Q15973 351 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 WFDC3Q8IUB2 231 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 STPG3Q8N7X2 389 aa17.02■□□□□ 0.32
CLDND1-230ENST00000514537 DNASE2O00115 360 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-230ENST00000514537 SPRY2O43597 315 aa17.01■□□□□ 0.31
CLDND1-230ENST00000514537 OR1S1Q8NH92 325 aa17.01■□□□□ 0.31
CLDND1-230ENST00000514537 Q8WTZ3 238 aa17.01■□□□□ 0.31
CLDND1-230ENST00000514537 NPIPB3Q92617 1050 aa17.01■□□□□ 0.31
CLDND1-230ENST00000514537 SFT2D2O95562 160 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 VAMP1P23763 118 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 ATP5IP56385 69 aaPredicted RBP17■□□□□ 0.31
CLDND1-230ENST00000514537 RPL11P62913 178 aaKnown RBP17■□□□□ 0.31
CLDND1-230ENST00000514537 DEFB135Q30KP9 77 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 RNF183Q96D59 192 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 U3KQE9 123 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 DNAH1Q9P2D7 4330 aa17■□□□□ 0.31
CLDND1-230ENST00000514537 PLECQ15149 4684 aaKnown RBP16.99■□□□□ 0.31
CLDND1-230ENST00000514537 LCE6AA0A183 80 aa16.99■□□□□ 0.31
CLDND1-230ENST00000514537 SLC25A6P12236 298 aa16.99■□□□□ 0.31
CLDND1-230ENST00000514537 PPP1R1AQ13522 171 aa16.99■□□□□ 0.31
CLDND1-230ENST00000514537 RBMS2Q15434 407 aaKnown RBP16.99■□□□□ 0.31
CLDND1-230ENST00000514537 BAK1Q16611 211 aa16.99■□□□□ 0.31
CLDND1-230ENST00000514537 P2RY1P47900 373 aa16.98■□□□□ 0.31
CLDND1-230ENST00000514537 CENPSQ8N2Z9 138 aa16.98■□□□□ 0.31
CLDND1-230ENST00000514537 ACY3Q96HD9 319 aa16.98■□□□□ 0.31
CLDND1-230ENST00000514537 NARS2Q96I59 477 aaKnown RBP16.98■□□□□ 0.31
CLDND1-230ENST00000514537 FAM24BQ8N5W8 94 aa16.97■□□□□ 0.31
CLDND1-230ENST00000514537 CSTL1Q9H114 145 aa16.97■□□□□ 0.31
CLDND1-230ENST00000514537 TMED3Q9Y3Q3 217 aa16.97■□□□□ 0.31
CLDND1-230ENST00000514537 NAP1L6A6NFF2 107 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 FAM90A26D6RGX4 464 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 TOMM40O96008 361 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 IFNA4P05014 189 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 HNRNPCP07910 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLDND1-230ENST00000514537 RD3LP0DJH9 198 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 GPX4P36969 197 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-230ENST00000514537 DEFB131AP59861 70 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 TRIQKQ629K1 86 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 GRAMD2BQ96HH9 432 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 SDHCQ99643 169 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-230ENST00000514537 RABAC1Q9UI14 185 aa16.96■□□□□ 0.31
CLDND1-230ENST00000514537 K7EQG2 157 aa16.95■□□□□ 0.3
CLDND1-230ENST00000514537 INPP1P49441 399 aa16.95■□□□□ 0.3
CLDND1-230ENST00000514537 UBE2MP61081 183 aaKnown RBP16.95■□□□□ 0.3
CLDND1-230ENST00000514537 USF2Q15853 346 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-230ENST00000514537 A0A0J9YWU9 116 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 MPTX1A8MV57 137 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 IL4P05112 153 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 LEMD1Q68G75 181 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 C16orf54Q6UWD8 224 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 LYG2Q86SG7 212 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 STXBP6Q8NFX7 210 aa16.94■□□□□ 0.3
CLDND1-230ENST00000514537 NDUFB6O95139 128 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 HOXB5P09067 269 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 IAPPP10997 89 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 PSG1P11464 419 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 GAMTQ14353 236 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 DCANP1Q8TF63 244 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 GLMPQ8WWB7 406 aa16.93■□□□□ 0.3
CLDND1-230ENST00000514537 HELTA6NFD8 242 aa16.92■□□□□ 0.3
CLDND1-230ENST00000514537 MED6O75586 246 aa16.92■□□□□ 0.3
CLDND1-230ENST00000514537 EIF2B2P49770 351 aaKnown RBP16.92■□□□□ 0.3
CLDND1-230ENST00000514537 GGNBP1Q5YKI7 109 aa16.92■□□□□ 0.3
CLDND1-230ENST00000514537 IGKV1D-37A0A075B6S9 117 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 C9orf170A2RU37 121 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 BUB3O43684 328 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 AP2S1P53680 142 aaPredicted RBP16.91■□□□□ 0.3
CLDND1-230ENST00000514537 RAB11AP62491 216 aa16.91■□□□□ 0.3
CLDND1-230ENST00000514537 EWSR1Q01844 656 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLDND1-230ENST00000514537 GATAD1Q8WUU5 269 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms