RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RBPMSQ93062 196 aaKnown RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 TMEM230Q96A57 120 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 METTL26Q96S19 204 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 PRRT1Q99946 306 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 KRTAP17-1Q9BYP8 105 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-216ENST00000512683 APLNQ9ULZ1 77 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 HERC2O95714 4834 aa9.16□□□□□ -0.94
VEGFA-216ENST00000512683 DNAH10Q8IVF4 4471 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 ZNF705EA8MWA4 302 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-216ENST00000512683 CLN5O75503 358 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 DHODHQ02127 395 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 Q8NAQ8 132 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 OR4X1Q8NH49 305 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 OR52E5Q8NH55 327 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
VEGFA-216ENST00000512683 GPR146Q96CH1 333 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 CACNG5Q9UF02 275 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
VEGFA-216ENST00000512683 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 AGRNO00468 2067 aa9.15□□□□□ -0.94
VEGFA-216ENST00000512683 FABP12A6NFH5 140 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 IGLL5B9A064 214 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 K7EQG2 157 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
VEGFA-216ENST00000512683 TMEM170AQ8WVE7 144 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 ENY2Q9NPA8 101 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
VEGFA-216ENST00000512683 TRAV10A0A0B4J240 114 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 RPS10-NUDT3A0A1W2PQS6 291 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 HELTA6NFD8 242 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-216ENST00000512683 OPRK1P41145 380 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 HTR2BP41595 481 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 NUTF2P61970 127 aaKnown RBP9.13□□□□□ -0.95
VEGFA-216ENST00000512683 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
VEGFA-216ENST00000512683 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 RNF126Q9BV68 326 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 RABAC1Q9UI14 185 aa9.13□□□□□ -0.95
VEGFA-216ENST00000512683 IGHV3-66A0A0C4DH42 116 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 PRR20EP86478 221 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 PRR20CP86479 221 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 PRR20DP86480 221 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 PRR20BP86481 221 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 PRR20AP86496 221 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 C2orf83Q53S99 150 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 Q8WTZ3 238 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 IL22RA2Q969J5 263 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 TRIM63Q969Q1 353 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 HEYLQ9NQ87 328 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-216ENST00000512683 SCP2D1Q9UJQ7 156 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 KCNIP3Q9Y2W7 256 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 U3KQE9 123 aa9.12□□□□□ -0.95
VEGFA-216ENST00000512683 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 NOL3O60936 208 aaKnown RBP9.11□□□□□ -0.95
VEGFA-216ENST00000512683 NXPH3O95157 252 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 RBMY1A1P0DJD3 496 aaKnown RBP9.11□□□□□ -0.95
VEGFA-216ENST00000512683 RBMY1CP0DJD4 496 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 SLC25A4P12235 298 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 HLA-DMBP28068 263 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 P2RY1P47900 373 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 YPEL3P61236 119 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-216ENST00000512683 KLF9Q13886 244 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-216ENST00000512683 RBMY1FQ15415 496 aaKnown RBP9.11□□□□□ -0.95
VEGFA-216ENST00000512683 TIGITQ495A1 244 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 PRSS54Q6PEW0 395 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 LYZL2Q7Z4W2 148 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 NOXA1Q86UR1 476 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 DCANP1Q8TF63 244 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 MCUBQ9NWR8 336 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 TBC1D24Q9ULP9 559 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 V9GYH0 126 aa9.11□□□□□ -0.95
VEGFA-216ENST00000512683 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 DEFB4AO15263 64 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 AKR1C4P17516 323 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 NPY1RP25929 384 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 ZNF79Q15937 498 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 CSNK1G2-AS1Q8NCQ2 148 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 OR1S2Q8NGQ3 325 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
VEGFA-216ENST00000512683 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 RAB40CQ96S21 281 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 BATF3Q9NR55 127 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms