RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ERVK11-1P61568 191 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 KIR3DS1Q14943 382 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 PMVKQ15126 192 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 CYP2G1PQ6ZSU1 146 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 C2orf16Q68DN1 1984 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 CD59P13987 128 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 ZNF818PQ6ZRF7 136 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 TM2D1Q9BX74 207 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
CPNE4-209ENST00000512055 AHRRA9YTQ3 701 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 CD8AP01732 235 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
CPNE4-209ENST00000512055 RNF7Q9UBF6 113 aa9.1□□□□□ -0.95
CPNE4-209ENST00000512055 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 PGLYRP1O75594 196 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-209ENST00000512055 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 AMBPP02760 352 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 GCHFRP30047 84 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 PRB3Q04118 309 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FER1L5A0AVI2 2057 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 TRAV41A0A0B4J266 112 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 MOSP00540 346 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
CPNE4-209ENST00000512055 CD300EQ496F6 205 aaPredicted RBP9.09□□□□□ -0.95
CPNE4-209ENST00000512055 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
CPNE4-209ENST00000512055 HIST3H2BBQ8N257 126 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 OR5P3Q8WZ94 311 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 RPRMQ9NS64 109 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 CEACAM4O75871 244 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 CELA3BP08861 270 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 NPSP0C0P6 89 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 GGNQ86UU5 652 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 CRIM1Q9NZV1 1036 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A10PA6NDY2 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A18PA6NE21 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A16PA6NEW6 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A20PA6NIJ5 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A8PA6NJQ4 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A7PA6NKC0 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A22PA8MWA6 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A12PA8MX19 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A5PA8MXJ8 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A23PA8MXZ1 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 C16orf97H3BN30 126 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 IGKCP01834 107 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A15PP0C7V4 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A13PP0C7W8 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A14PP0C7W9 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM90A24PP0C7X0 464 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 AZU1P20160 251 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 FAM159AQ6UWV7 190 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 STPG3Q8N7X2 389 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 C1QTNF5Q9BXJ0 243 aa9.09□□□□□ -0.95
CPNE4-209ENST00000512055 A0A087WWC5 75 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 TRAV14DV4A0A0A6YYC5 116 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 WNT9BO14905 357 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 GFRA3O60609 400 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 TCTEX1D4Q5JR98 221 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 WDR82Q6UXN9 313 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 ANKRD29Q8N6D5 301 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 REPIN1Q9BWE0 567 aaKnown RBP9.08□□□□□ -0.96
CPNE4-209ENST00000512055 WNT2P09544 360 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 TMEM187Q14656 261 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 LRTM2Q8N967 370 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 NABP1Q96AH0 204 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 OBSL1O75147 1896 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 IGKV1D-8A0A087WSZ0 117 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 CCL1P22362 96 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 LY6G6FQ5SQ64 297 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 ITLN1Q8WWA0 313 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-209ENST00000512055 COL4A4P53420 1690 aaPredicted RBP9.08□□□□□ -0.96
CPNE4-209ENST00000512055 ESPL1Q14674 2120 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 CLDN14O95500 239 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 PSG9Q00887 426 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 DIRC2Q96SL1 478 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 LTBP2Q14767 1821 aa9.08□□□□□ -0.96
CPNE4-209ENST00000512055 PCNX1Q96RV3 2341 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 LY6G6EA0A0G2JKS1 128 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 IGKV3-20P01619 116 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 CSRP2Q16527 193 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 LCNL1Q6ZST4 164 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
CPNE4-209ENST00000512055 SDF2L1Q9HCN8 221 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 U3KQA8 63 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 GUSBP1Q15486 140 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 Q6ZT83 130 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 FER1L6-AS1Q8NA97 138 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 CCL13Q99616 98 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 TUBA4BQ9H853 241 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 COL6A6A6NMZ7 2263 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 ABCA1O95477 2261 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 PKDREJQ9NTG1 2253 aa9.07□□□□□ -0.96
CPNE4-209ENST00000512055 HAPLN4Q86UW8 402 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms