RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LINC00470Q9BZP3 86 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RNF7Q9UBF6 113 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TP73-AS1Q9UF72 201 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FBXL2Q9UKC9 423 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF98A6NK75 572 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SRRM4A7MD48 611 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 M0R1B8 84 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL21O00585 134 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GEMIN2O14893 280 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DHHO43323 396 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 BCL2L11O43521 198 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PSPNO60542 156 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NCR1O76036 304 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TNFSF15O95150 251 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GYPAP02724 150 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF888P0CJ79 500 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MPC1LP0DKB6 136 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ACRP10323 421 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FGF6P10767 208 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 EGR2P11161 476 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MMP9P14780 707 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PI3P19957 117 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PSMB1P20618 241 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPL12P30050 165 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 UBE2BP63146 152 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DLK1P80370 383 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLAQ13239 276 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GUSBP11Q6P575 273 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC25A34Q6PIV7 304 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 Q6ZWC4 215 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 WFDC3Q8IUB2 231 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PNKDQ8N490 385 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NKAPP1Q8N9T2 125 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR1F12Q8NHA8 337 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NUBPLQ8TB37 319 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM57AQ8TBR7 257 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM222BQ8WU58 562 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 BAALCQ8WXS3 180 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM54Q969K7 222 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLAMF6Q96DU3 332 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DUX5Q96PT3 197 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRADC1Q9BSG0 188 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PIMREGQ9BSJ6 248 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRSS22Q9GZN4 317 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NIT2Q9NQR4 276 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRPL16Q9NX20 251 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 METTL1Q9UBP6 276 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PEF1Q9UBV8 284 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRM2Q9UI43 246 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRAV6A0A075B6T7 132 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV1-12A0A0C4DH73 117 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A0G2JRQ6 117 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 hCG_38984A0A1B0GV85 526 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CXorf65A6NEN9 183 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 F6UB75 175 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 H0Y980 276 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GGCTO75223 188 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 HPRT1P00492 218 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV1D-12P01611 117 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GAPDHP04406 335 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SP1P08047 785 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ARL14EPLP0DKL9 152 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SRIP30626 198 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DCTDP32321 178 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DLX6P56179 175 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 B3GALT5-AS1P59052 145 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PLP1P60201 277 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD83Q01151 205 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ID2Q02363 134 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 KLF5Q13887 457 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 PIP5KL1Q5T9C9 394 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C1QL3Q5VWW1 255 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CNIH2Q6PI25 160 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM136Q6ZRR5 245 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MBOAT2Q6ZWT7 520 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM99Q8N816 258 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C8orf31Q8N9H6 132 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR1P1Q8NH06 330 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ST8SIA1Q92185 356 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GHSRQ92847 366 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPSB1Q96BD6 273 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 NSG2Q9Y328 171 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRAPPC1Q9Y5R8 145 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A0B4J2E0 115 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1B0GX12 115 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1B0GX78 115 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 FEZF1A0PJY2 475 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 MAP1LC3B2A6NCE7 125 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF729A6NN14 1252 aaPredicted RBP1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 C15orf61A6NNL5 157 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 HMSDA8MTL9 139 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 B4DEV8 164 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF561-AS1K7EIQ3 104 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 TGFAP01135 160 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 ARG1P05089 322 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 FUT3P21217 361 aa1.36□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD70P32970 193 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms