RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 CISHQ9NSE2 258 aa2.2□□□□□ -2.06
MBD4-209ENST00000511009 IL36BQ9NZH7 164 aa2.2□□□□□ -2.06
MBD4-209ENST00000511009 RBM7Q9Y580 266 aaKnown RBP2.2□□□□□ -2.06
MBD4-209ENST00000511009 DUOX1Q9NRD9 1551 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 SIPA1L3O60292 1781 aaPredicted RBP2.19□□□□□ -2.06
MBD4-209ENST00000511009 LY6LH3BQJ8 138 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 PRM2P04554 102 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 HLA-DMBP28068 263 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 DEFA1P59665 94 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 RAB14P61106 215 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 TMEM258P61165 79 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H4AP62805 103 aaKnown RBP2.19□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H3AP68431 136 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 HBA1P69905 142 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 H3F3AP84243 136 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 SS18Q15532 418 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 ZNF676Q8N7Q3 588 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 OR8B12Q8NGG6 310 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 SIGMAR1Q99720 223 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 TMEM147Q9BVK8 224 aa2.19□□□□□ -2.06
MBD4-209ENST00000511009 CCDC94Q9BW85 323 aaPredicted RBP2.19□□□□□ -2.06
MBD4-209ENST00000511009 KDM3BQ7LBC6 1761 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 TRAV38-1A0A0B4J264 116 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 FAM236DA0A1B0GTK5 79 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 J3QQQ9 107 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 SERPINA1P01009 418 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 LGALS1P09382 135 aaKnown RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 P0DMU3 169 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 FAM231AP0DMU4 169 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 FAM231CP0DMU5 169 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 FAM236CP0DP71 79 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 RPL26P61254 145 aaKnown RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 CCL20P78556 96 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 RPL18Q07020 188 aaKnown RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 OR6V1Q8N148 313 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 CDC26Q8NHZ8 85 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 MCFD2Q8NI22 146 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 SLC7A6Q92536 515 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 KLF6Q99612 283 aaPredicted RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 NMNAT1Q9HAN9 279 aaPredicted RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 FBXL12Q9NXK8 326 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 RPL26L1Q9UNX3 145 aaKnown RBP2.18□□□□□ -2.06
MBD4-209ENST00000511009 TIMM22Q9Y584 194 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 TMEM56-RWDD3S4R434 201 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 SSC5DA1L4H1 1573 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 ANKRD36CQ5JPF3 1778 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 MYO16Q9Y6X6 1858 aa2.18□□□□□ -2.06
MBD4-209ENST00000511009 LRRC37AA6NMS7 1700 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 IGHV3-64A0A075B6Q5 118 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 TRAV26-2A0A0B4J265 109 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 ARRDC5A6NEK1 342 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 H7C2G1 150 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 PIRO00625 290 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 PDE6DO43924 150 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HAND1O96004 215 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 C1QAP02745 245 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 MSMBP08118 114 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 SULT1A3P0DMM9 295 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 SULT1A4P0DMN0 295 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BOP23527 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 PEBP1P30086 187 aaKnown RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BBP33778 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BDP58876 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 RPS20P60866 119 aaKnown RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BCP62807 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST2H2BEQ16778 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 IAH1Q2TAA2 248 aaPredicted RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 LIN52Q52LA3 116 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 AADACL3Q5VUY0 350 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 RPL22L1Q6P5R6 122 aaKnown RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BHQ93079 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 CEP19Q96LK0 163 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 PHB2Q99623 299 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BNQ99877 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 HIST1H2BMQ99879 126 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 NIPSNAP1Q9BPW8 284 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 TXNDC17Q9BRA2 123 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 CCDC90BQ9GZT6 254 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 C11orf68Q9H3H3 251 aaKnown RBP2.17□□□□□ -2.06
MBD4-209ENST00000511009 SIPA1L1O43166 1804 aa2.17□□□□□ -2.06
MBD4-209ENST00000511009 SCN9AQ15858 1988 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 LAMB2P55268 1798 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 TRAV9-1A0A075B6T8 112 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 EXOC1LA0A1B0GW35 172 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 hADV38S2A0JD32 116 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 IRGMA1A4Y4 181 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 FABP5P3A8MUU1 101 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 H3BRN7 92 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 SLC22A1O15245 554 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 CIAO1O76071 339 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 IGHV3-7P01780 117 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 PPBPP02775 128 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 CAPZBP47756 277 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 GLO1Q04760 184 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 KRT222Q8N1A0 295 aa2.16□□□□□ -2.06
MBD4-209ENST00000511009 RPP25LQ8N5L8 163 aaKnown RBP2.16□□□□□ -2.06
MBD4-209ENST00000511009 OR51A2Q8NGJ7 313 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms