RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 OR4C13Q8NGP0 309 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 TMEM186Q96B77 213 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 FLYWCH2Q96CP2 140 aaKnown RBP12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF503Q96F45 646 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 PRO1933Q9H354 126 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 OSTCQ9NRP0 149 aa12.91□□□□□ -0.34
SQSTM1-213ENST00000510187 POLQO75417 2590 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 HELTA6NFD8 242 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 ESDP10768 282 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 HNF1AP20823 631 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 ZNF137PP52743 207 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 DSCR9P59020 149 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 PRSS8Q16651 343 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 LBHQ53QV2 105 aaPredicted RBP12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 V9GYV3 84 aa12.9□□□□□ -0.34
SQSTM1-213ENST00000510187 PSMB11A5LHX3 300 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 OR7C2O60412 319 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 TIGITQ495A1 244 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 MOB3BQ86TA1 216 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 ZNF664Q8N3J9 261 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 BEND2Q8NDZ0 799 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 SLC25A33Q9BSK2 321 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 ZNRD1Q9P1U0 126 aa12.89□□□□□ -0.35
SQSTM1-213ENST00000510187 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 A8MWP6 167 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 MT-ND6P03923 174 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 SUB1P53999 127 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■■■□ 26.7
SQSTM1-213ENST00000510187 ERVFC1-1P60608 527 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 OR10X1Q8NGY0 326 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 WASHC3Q9Y3C0 194 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 VWC2LB2RUY7 222 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 SLC17A3O00476 420 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 ISLRO14498 428 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 CCL3L1P16619 93 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 CRYBB3P26998 211 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 RAB4BP61018 213 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 WDR73Q6P4I2 378 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 LRRC75A-AS1Q8N1F1 130 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 OR1L6Q8NGR2 347 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 OR1L4Q8NGR5 311 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 MRPL18Q9H0U6 180 aaKnown RBP12.88□□□□□ -0.35
SQSTM1-213ENST00000510187 THAP8Q8NA92 274 aa12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 ZNF430Q9H8G1 570 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 DNAJC4Q9NNZ3 241 aa12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 NAV2Q8IVL1 2488 aa12.87□□□□□ -0.35
SQSTM1-213ENST00000510187 MALRD1Q5VYJ5 2156 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 APCP25054 2843 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 ANKRD17O75179 2603 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 CBLN1P23435 193 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 TPPP2P59282 170 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 TAS2R60P59551 318 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 BPIFB3P59826 476 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 LMO4P61968 165 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 Q0VG73 95 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 IGF2BP2-AS1Q96M15 143 aa12.86□□□□□ -0.35
SQSTM1-213ENST00000510187 IGHV4-61A0A0C4DH41 118 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 IGLV2-23P01705 113 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 CRISP2P16562 243 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 GATA2P23769 480 aaPredicted RBP12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 MC5RP33032 325 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 DLX6P56179 175 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 CX3CL1P78423 397 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 VMA21Q3ZAQ7 101 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 MS4A10Q96PG2 267 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 LOC105371242A0A075B767 164 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 TCRBV4S1A1TA0A5B7 111 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 C22orf46C9J442 243 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 PPIAL4GP0DN37 164 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 CDC42EP3Q9UKI2 254 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
SQSTM1-213ENST00000510187 CGB1A6NKQ9 187 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 FCN1O00602 326 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 IGLV2-8P01709 118 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 SLC25A16P16260 332 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 LGALS7P47929 136 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 OR5I1Q13606 314 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 MLANAQ16655 118 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 TGIF2LXQ8IUE1 241 aa12.84□□□□□ -0.35
SQSTM1-213ENST00000510187 OR8I2Q8N0Y5 310 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms