RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ATP5IP56385 69 aaPredicted RBP13.87□□□□□ -0.19
UBE3D-207ENST00000509102 GBGT1Q8N5D6 347 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 Q8WTZ3 238 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 ST8SIA2Q92186 375 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 VSIRQ9H7M9 311 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
UBE3D-207ENST00000509102 KIR2DL5BA0A0G2JN68 375 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 KIR2DL5BA0A0G2JPC4 375 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 OR10J1P30954 320 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
UBE3D-207ENST00000509102 RBMS2Q15434 407 aaKnown RBP13.86□□□□□ -0.19
UBE3D-207ENST00000509102 MLANAQ16655 118 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 PRSS54Q6PEW0 395 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 Q6ZWC4 215 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 KIR2DL5AQ8N109 375 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 KIR2DL5BQ8NHK3 375 aa13.86□□□□□ -0.19
UBE3D-207ENST00000509102 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 NAP1L6A6NFF2 107 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 IFNA4P05014 189 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 TIGITQ495A1 244 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 FAM90A2PQ658T7 463 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 RBKSQ9H477 322 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 MRPL36Q9P0J6 103 aaKnown RBP13.85□□□□□ -0.19
UBE3D-207ENST00000509102 TP53TG1Q9Y2A0 90 aa13.85□□□□□ -0.19
UBE3D-207ENST00000509102 TRAV2A0A0B4J234 112 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 CENPXA8MT69 81 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 DFFBO76075 338 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 IGKV1-17P01599 117 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 IGLC1P0CG04 106 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
UBE3D-207ENST00000509102 YPEL3P61236 119 aaPredicted RBP13.84□□□□□ -0.19
UBE3D-207ENST00000509102 WFDC3Q8IUB2 231 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 APRG1Q8IVJ8 170 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 ACY3Q96HD9 319 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 SRRQ9GZT4 340 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 MS4A6AQ9H2W1 248 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 RABAC1Q9UI14 185 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 TMED3Q9Y3Q3 217 aa13.84□□□□□ -0.19
UBE3D-207ENST00000509102 SPRY2O43597 315 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 MED6O75586 246 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 APOHP02749 345 aaPredicted RBP13.83□□□□□ -0.2
UBE3D-207ENST00000509102 SLC25A6P12236 298 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 CRYBB3P26998 211 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 UBE2MP61081 183 aaKnown RBP13.83□□□□□ -0.2
UBE3D-207ENST00000509102 LRTM2Q8N967 370 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 OVOL2Q9BRP0 275 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
UBE3D-207ENST00000509102 FAM90A26D6RGX4 464 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 SFT2D2O95562 160 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 P2RY1P47900 373 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 RAB11AP62491 216 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 RPP30P78346 268 aaKnown RBP13.82□□□□□ -0.2
UBE3D-207ENST00000509102 DEFB135Q30KP9 77 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 SLC35E1Q96K37 410 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 MAP6D1Q9H9H5 199 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 PFDN2Q9UHV9 154 aa13.82□□□□□ -0.2
UBE3D-207ENST00000509102 DNAH7Q8WXX0 4024 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 HELTA6NFD8 242 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 IL4P05112 153 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 FABP1P07148 127 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 HNRNPCP07910 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE3D-207ENST00000509102 RD3LP0DJH9 198 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 PPP1R1AQ13522 171 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 STXBP6Q8NFX7 210 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
UBE3D-207ENST00000509102 CIB3Q96Q77 187 aaPredicted RBP13.81□□□□□ -0.2
UBE3D-207ENST00000509102 MPTX1A8MV57 137 aa13.8□□□□□ -0.2
UBE3D-207ENST00000509102 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-207ENST00000509102 NUP62P37198 522 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-207ENST00000509102 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
UBE3D-207ENST00000509102 CSTL1Q9H114 145 aa13.8□□□□□ -0.2
UBE3D-207ENST00000509102 PAIP2BQ9ULR5 123 aaKnown RBP13.8□□□□□ -0.2
UBE3D-207ENST00000509102 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 TOMM40O96008 361 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 HOXB5P09067 269 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 DEFB131AP59861 70 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 LILRB2Q8N423 598 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 TMEM217Q8N7C4 229 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 COQ8AQ8NI60 647 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 RNF183Q96D59 192 aa13.79□□□□□ -0.2
UBE3D-207ENST00000509102 C7orf50Q9BRJ6 194 aaKnown RBP13.79□□□□□ -0.2
UBE3D-207ENST00000509102 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 PITX3O75364 302 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 NDUFB6O95139 128 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 IAPPP10997 89 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 BAK1Q16611 211 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 OR51G1Q8NGK1 321 aa13.78□□□□□ -0.2
UBE3D-207ENST00000509102 IFNA21P01568 189 aa13.77□□□□□ -0.21
UBE3D-207ENST00000509102 ZNF124Q15973 351 aa13.77□□□□□ -0.21
UBE3D-207ENST00000509102 CNPY1Q3B7I2 92 aa13.77□□□□□ -0.21
UBE3D-207ENST00000509102 STHQ8IWL8 128 aa13.77□□□□□ -0.21
UBE3D-207ENST00000509102 SYNGR2O43760 224 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 JTBO76095 146 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 PSG1P11464 419 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 GGNBP1Q5YKI7 109 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 LYG2Q86SG7 212 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms