RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TMEM231Q9H6L2 316 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 MRPL27Q9P0M9 148 aaKnown RBP6.97□□□□□ -1.29
NUP54-207ENST00000508583 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
NUP54-207ENST00000508583 SORL1Q92673 2214 aa6.97□□□□□ -1.29
NUP54-207ENST00000508583 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 C7orf66A4D0T2 115 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 FNDC10F2Z333 226 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 IGLV1-51P01701 117 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 IGHV3-48P01763 117 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 MBPP02686 304 aaPredicted RBP6.96□□□□□ -1.3
NUP54-207ENST00000508583 CBLN1P23435 193 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 OR10J1P30954 320 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 ADMP35318 185 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 NUP62P37198 522 aaPredicted RBP6.96□□□□□ -1.3
NUP54-207ENST00000508583 S100A10P60903 97 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 YPEL3P61236 119 aaPredicted RBP6.96□□□□□ -1.3
NUP54-207ENST00000508583 PRR20EP86478 221 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 PRR20CP86479 221 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 PRR20DP86480 221 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 PRR20BP86481 221 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 PRR20AP86496 221 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 LAMTOR1Q6IAA8 161 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 OR10P1Q8NGE3 313 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 Q8WTZ3 238 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 TMEM170AQ8WVE7 144 aa6.96□□□□□ -1.3
NUP54-207ENST00000508583 RCL1Q9Y2P8 373 aaKnown RBP6.96□□□□□ -1.3
NUP54-207ENST00000508583 LSM5Q9Y4Y9 91 aaKnown RBP6.96□□□□□ -1.3
NUP54-207ENST00000508583 TRAV14DV4A0A0A6YYC5 116 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 TRAV25A0A0B4J276 109 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 IGHV3-35A0A0C4DH35 117 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 A0A1W2PS18 150 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 ZFP92A6NM28 416 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 H3BP45 60 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 K7EPK0 472 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 CFDP00746 253 aaPredicted RBP6.95□□□□□ -1.3
NUP54-207ENST00000508583 IGLC1P0CG04 106 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
NUP54-207ENST00000508583 BCAP31P51572 246 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 CAV2P51636 162 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 AKR1C1Q04828 323 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 UNQ9165/PRO28630Q6UXU0 137 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 IL34Q6ZMJ4 242 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 RBPMS2Q6ZRY4 209 aaKnown RBP6.95□□□□□ -1.3
NUP54-207ENST00000508583 S100A7AQ86SG5 101 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 STX12Q86Y82 276 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 ASB13Q8WXK3 278 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 NPIPB3Q92617 1050 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 GRAMD2BQ96HH9 432 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 METTL26Q96S19 204 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 GGACTQ9BVM4 153 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 MGAT4CQ9UBM8 478 aa6.95□□□□□ -1.3
NUP54-207ENST00000508583 PUS1Q9Y606 427 aaKnown RBP eCLIP6.95□□□□□ -1.3
NUP54-207ENST00000508583 E5RGE8 158 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 TOMM40O96008 361 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 IGKV1-17P01599 117 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 METTL15P1P0C7V9 234 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 RD3LP0DJH9 198 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 C8orf88P0DMB2 117 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 GP9P14770 177 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 NPPCP23582 126 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 HBG1P69891 147 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 HBG2P69892 147 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 DLK1P80370 383 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 GAMTQ14353 236 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 TM4SF20Q53R12 229 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 OR8G2PQ6IF36 304 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 TOMM20LQ6UXN7 152 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 TMEM14EPQ6UXP3 125 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 SLC25A31Q9H0C2 315 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 MED28Q9H204 178 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 LYRM2Q9NU23 88 aaPredicted RBP6.94□□□□□ -1.3
NUP54-207ENST00000508583 AURKAIP1Q9NWT8 199 aaPredicted RBP6.94□□□□□ -1.3
NUP54-207ENST00000508583 ALG5Q9Y673 324 aa6.94□□□□□ -1.3
NUP54-207ENST00000508583 IGHV7-4-1A0A0J9YVY3 117 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 SMCO3A2RU48 225 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 DEDDO75618 318 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
NUP54-207ENST00000508583 SPNP16150 400 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 KRTAP10-11P60412 298 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 IL15RAQ13261 267 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 RAB31Q13636 194 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 RAB32Q13637 225 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 MLANAQ16655 118 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 TIGITQ495A1 244 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 CD300EQ496F6 205 aaPredicted RBP6.93□□□□□ -1.3
NUP54-207ENST00000508583 C11orf87Q6NUJ2 197 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 ACOT7LQ6ZUV0 252 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 TMEM144Q7Z5S9 345 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 MRAPQ8TCY5 172 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 TRGV9Q99603 122 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 RNF24Q9Y225 148 aa6.93□□□□□ -1.3
NUP54-207ENST00000508583 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
NUP54-207ENST00000508583 IL4P05112 153 aa6.92□□□□□ -1.3
NUP54-207ENST00000508583 S100A11P31949 105 aa6.92□□□□□ -1.3
NUP54-207ENST00000508583 SULT1A1P50225 295 aa6.92□□□□□ -1.3
NUP54-207ENST00000508583 PAX9P55771 341 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms