RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NUP205Q92621 2012 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TRBV20OR9-2A0A075B6H5 130 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TRAV27A0A087WT01 109 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 TLCD2A6NGC4 264 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF727A8MUV8 499 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 FAM220BPB1ANY3 271 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 GNGT2O14610 69 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 CRISP2P16562 243 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 CRYGSP22914 178 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 C1orf140Q5VVS0 124 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 EBLN2Q6P2I7 272 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 MARCH3Q86UD3 253 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 DCANP1Q8TF63 244 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 RTN4IP1Q8WWV3 396 aaPredicted RBP5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ELSPBP1Q96BH3 223 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF702PQ9H963 129 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 BET1LQ9NYM9 111 aa5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
PDGFRA-206ENST00000508170 PLXNB2O15031 1838 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 CCL15-CCL14A0A0B4J2E2 113 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 DPRXA6NFQ7 191 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 M0R1X1 148 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 FXYD1O00168 92 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 TAS2R19P59542 299 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 IQCJQ1A5X6 159 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 C17orf58Q2M2W7 97 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 EIF5AL1Q6IS14 154 aaKnown RBP5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 REG3GQ6UW15 175 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 VAMP8Q9BV40 100 aa5.69□□□□□ -1.5
PDGFRA-206ENST00000508170 TRAV9-1A0A075B6T8 112 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 A0A0J9YW62 118 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 SMIM35A0A1B0GVV1 85 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 FAM72CH0Y354 149 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 TAX1BP3O14907 124 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 SYNJ2BPP57105 145 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 EIF5AP63241 154 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 FOXI1Q12951 378 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 FAM72AQ5TYM5 149 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 FAM72DQ6L9T8 149 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 TRAPPC6BQ86SZ2 158 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 FAM72BQ86X60 149 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 RPP25LQ8N5L8 163 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 LYZL4Q96KX0 146 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 C18orf15Q96N68 181 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 SPIN2AQ99865 258 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 SPIN2BQ9BPZ2 258 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 BANF2Q9H503 90 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 TPRKBQ9Y3C4 175 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 LRRK1Q38SD2 2015 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 DOCK6Q96HP0 2047 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 ARRDC5A6NEK1 342 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 M0R129 80 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 DAPP51397 102 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 Q6AWC8 147 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 LAIR2Q6ISS4 152 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 ALKAL2Q6UX46 152 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00305Q7Z4B0 112 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 MSRB3Q8IXL7 192 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 HYLS1Q96M11 299 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 GOLGA2P5Q9HBQ8 144 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 F11RQ9Y624 299 aaKnown RBP5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 TRIP12Q14669 1992 aaPredicted RBP5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 SHROOM3Q8TF72 1996 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF236Q9UL36 1845 aa5.68□□□□□ -1.5
PDGFRA-206ENST00000508170 CD300LBA8K4G0 201 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 A8MWV9 139 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 COX7A2LO14548 114 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 NAPSAO96009 420 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 PRSS1P07477 247 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 FABP2P12104 132 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 PLA2G5P39877 138 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 TMEM61Q8N0U2 210 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00311Q8N616 119 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 OR5C1Q8NGR4 320 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 DUSP21Q9H596 190 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 DYSFO75923 2080 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 BPTFQ12830 3046 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 C9JQL5 133 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 OR2T1O43869 369 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 IGHV3-43DP0DP04 118 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 CRYBB3P26998 211 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 SLC25A46Q96AG3 418 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 ABHD14BQ96IU4 210 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 SPANXDQ9BXN6 97 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 BRCA2P51587 3418 aa5.67□□□□□ -1.5
PDGFRA-206ENST00000508170 DSPPQ9NZW4 1301 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 TRGV10A0A0A0MS01 117 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 A0A1W2PP18 115 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 ETV2O00321 342 aaPredicted RBP5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 IL3RAP26951 378 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 LINC00303Q3SY05 128 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 KHDC3LQ587J8 217 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 MRPL54Q6P161 138 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 ZNF584Q8IVC4 421 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 HIST3H2BBQ8N257 126 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 S100A13Q99584 98 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 CKLFQ9UBR5 152 aa5.66□□□□□ -1.5
PDGFRA-206ENST00000508170 TP73-AS1Q9UF72 201 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms