RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SSTP61278 116 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 ARF6P62330 175 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 PNKDQ8N490 385 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
DDX41-208ENST00000507955 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 IL36BQ9NZH7 164 aa11.63□□□□□ -0.55
DDX41-208ENST00000507955 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 IGHV1-3A0A0C4DH29 117 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 ZNF137PP52743 207 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 PATE2Q6UY27 113 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 VSTM2AQ8TAG5 236 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 FBXL15Q9H469 300 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 SELENOTP62341 195 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 Q6ZWC4 215 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 NHLRC2Q8NBF2 726 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 ST6GALNAC3Q8NDV1 305 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 SLC25A33Q9BSK2 321 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
DDX41-208ENST00000507955 A0A1W2PPR1 153 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 NDUFS7O75251 213 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 KLRD1Q13241 179 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 SLC25A2Q9BXI2 301 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
DDX41-208ENST00000507955 TECRQ9NZ01 308 aaKnown RBP11.61□□□□□ -0.55
DDX41-208ENST00000507955 HILPDAQ9Y5L2 63 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 V9GYV3 84 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 CFAP46Q8IYW2 2715 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 PSMB11A5LHX3 300 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 FNDC10F2Z333 226 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 OR5G3P0C626 314 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
DDX41-208ENST00000507955 C8orf31Q8N9H6 132 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 CMTM2Q8TAZ6 248 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 BTF3L4Q96K17 158 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
DDX41-208ENST00000507955 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 A0A1W2PN81 502 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 C9JCJ5 164 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 SERF1AO75920 110 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 MC5RP33032 325 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 IER3P46695 156 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 C1orf194Q5T5A4 169 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 OR5AU1Q8NGC0 362 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 CRYBG3Q68DQ2 2970 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 UTP20O75691 2785 aaKnown RBP11.6□□□□□ -0.55
DDX41-208ENST00000507955 SPINK4O60575 86 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 MT-CO2P00403 227 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 ORM2P19652 201 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
DDX41-208ENST00000507955 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 ZNF355PQ9NSJ1 428 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 SIGLEC9Q9Y336 463 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 PKD1L2Q7Z442 2459 aa11.6□□□□□ -0.55
DDX41-208ENST00000507955 H3BTX0 84 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 CDKN1AP38936 164 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 PRRX1P54821 245 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 FXYD3Q14802 87 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 MMD2Q8IY49 270 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 CACNG8Q8WXS5 425 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 RPEQ96AT9 228 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 RNASE7Q9H1E1 156 aaKnown RBP11.59□□□□□ -0.55
DDX41-208ENST00000507955 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 HELTA6NFD8 242 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 C8orf88P0DMB2 117 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 ERVFC1-1P60608 527 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 LEMD1Q68G75 181 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 FAM71F2Q6NXP2 309 aa11.59□□□□□ -0.55
DDX41-208ENST00000507955 COX7A2P2O60397 106 aa11.58□□□□□ -0.55
DDX41-208ENST00000507955 CRISP2P16562 243 aa11.58□□□□□ -0.55
DDX41-208ENST00000507955 RPL27AP46776 148 aaKnown RBP11.58□□□□□ -0.55
DDX41-208ENST00000507955 UBE2L3P68036 154 aaKnown RBP11.58□□□□□ -0.55
DDX41-208ENST00000507955 SLC35B1P78383 322 aa11.58□□□□□ -0.55
DDX41-208ENST00000507955 OR4A5Q8NH83 315 aa11.58□□□□□ -0.55
DDX41-208ENST00000507955 FAM103A1Q9BTL3 118 aaKnown RBP11.58□□□□□ -0.55
DDX41-208ENST00000507955 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
DDX41-208ENST00000507955 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
DDX41-208ENST00000507955 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
DDX41-208ENST00000507955 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
DDX41-208ENST00000507955 LGALS7P47929 136 aa11.58□□□□□ -0.56
DDX41-208ENST00000507955 NUTF2P61970 127 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms