RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ADMP35318 185 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 NPBWR1P48145 328 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 TMUB2Q71RG4 321 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 KLHL30-AS1Q8NEE0 82 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 TXN2Q99757 166 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
RNF4-208ENST00000507247 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 GNG7O60262 68 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 CTSGP08311 255 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 RUNX1Q01196 453 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 TIGITQ495A1 244 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 C8orf86Q6ZUL3 223 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 ARL6Q9H0F7 186 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 PEF1Q9UBV8 284 aaKnown RBP10.93□□□□□ -0.66
RNF4-208ENST00000507247 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
RNF4-208ENST00000507247 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
RNF4-208ENST00000507247 IGHV4OR15-8A0A075B7B6 117 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 A0A087WW49 117 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 BMPR1BO00238 502 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 TGOLN2O43493 480 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 DFFBO76075 338 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 OR10J1P30954 320 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 ARL3P36405 182 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 NSUN5P1Q3KNT7 163 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
RNF4-208ENST00000507247 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 NDUFA11Q86Y39 141 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 MGST2Q99735 147 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 CYTL1Q9NRR1 136 aa10.92□□□□□ -0.66
RNF4-208ENST00000507247 ZFP92A6NM28 416 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 BCL2L11O43521 198 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 FGF7P21781 194 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 ZNF90Q03938 601 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 BTNL8Q6UX41 500 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 TRGV9Q99603 122 aa10.91□□□□□ -0.66
RNF4-208ENST00000507247 WDR61Q9GZS3 305 aaKnown RBP10.91□□□□□ -0.66
RNF4-208ENST00000507247 GAR1Q9NY12 217 aaKnown RBP10.91□□□□□ -0.66
RNF4-208ENST00000507247 TRAV30A0A087WSZ9 112 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 IGHV3-35A0A0C4DH35 117 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 KANTRA0A1W2PQU2 76 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 TAAR5O14804 337 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 NUPL2O15504 423 aaKnown RBP10.9□□□□□ -0.66
RNF4-208ENST00000507247 HSPB1P04792 205 aaKnown RBP10.9□□□□□ -0.66
RNF4-208ENST00000507247 HNRNPCP07910 306 aaKnown RBP eCLIP10.9□□□□□ -0.664e-7■□□□□ 10.8
RNF4-208ENST00000507247 FAM209BQ5JX69 171 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 SPSB3Q6PJ21 355 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 TMEM182Q6ZP80 229 aaPredicted RBP10.9□□□□□ -0.66
RNF4-208ENST00000507247 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 RAX2Q96IS3 184 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.66
RNF4-208ENST00000507247 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
RNF4-208ENST00000507247 AGPAT2O15120 278 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 OR2C1O95371 312 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 IFNA5P01569 189 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
RNF4-208ENST00000507247 ZNF266Q14584 549 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 OPCMLQ14982 345 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 C3orf56Q8N813 242 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 PPP1R14BQ96C90 147 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 GGTLC1Q9BX51 225 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 RFNGQ9Y644 331 aa10.89□□□□□ -0.67
RNF4-208ENST00000507247 STAB1Q9NY15 2570 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 LINC01619G3V211 115 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 GGCTO75223 188 aaKnown RBP10.88□□□□□ -0.67
RNF4-208ENST00000507247 TOMM40O96008 361 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 PSG1P11464 419 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
RNF4-208ENST00000507247 CAMLGP49069 296 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 SLURP1P55000 103 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 YPEL3P61236 119 aaPredicted RBP10.88□□□□□ -0.67
RNF4-208ENST00000507247 ZNF616Q08AN1 781 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 FHL3Q13643 280 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 ZNF600Q6ZNG1 722 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 HSD17B11Q8NBQ5 300 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 SCGB1C1Q8TD33 95 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 ZNF471Q9BX82 626 aaPredicted RBP10.88□□□□□ -0.67
RNF4-208ENST00000507247 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
RNF4-208ENST00000507247 BORCS7-ASMTA0A0B4J1R7 106 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 CCL24O00175 119 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 MPDU1O75352 247 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 SCGB2A1O75556 95 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 ATP6V0CP27449 155 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 RPEL1Q2QD12 228 aa10.87□□□□□ -0.67
RNF4-208ENST00000507247 MIC13Q5XKP0 118 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms