RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 SDHCQ99643 169 aaPredicted RBP13.66□□□□□ -0.22
HOXD11-202ENST00000498438 U3KQ87 197 aa13.66□□□□□ -0.22
HOXD11-202ENST00000498438 OR10J1P30954 320 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 ETFRF1Q6IPR1 90 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 GBGT1Q8N5D6 347 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 OR1S2Q8NGQ3 325 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 METTL26Q96S19 204 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
HOXD11-202ENST00000498438 LINC00854A0A1B0GVQ3 168 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 NAP1L6A6NFF2 107 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 PITX3O75364 302 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 DFFBO76075 338 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 CD5P06127 495 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 NPPCP23582 126 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 ACY3Q96HD9 319 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 TMEM231Q9H6L2 316 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 NDUFA13Q9P0J0 144 aa13.64□□□□□ -0.23
HOXD11-202ENST00000498438 RYR3Q15413 4870 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 NDUFB6O95139 128 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 SLC25A6P12236 298 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 CRYBB3P26998 211 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 APOC4P55056 127 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
HOXD11-202ENST00000498438 APRG1Q8IVJ8 170 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 NPIPB3Q92617 1050 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
HOXD11-202ENST00000498438 DYNC2H1Q8NCM8 4307 aaKnown RBP13.63□□□□□ -0.23
HOXD11-202ENST00000498438 IFNA4P05014 189 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 IAPPP10997 89 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 RPL35AP18077 110 aaKnown RBP13.62□□□□□ -0.23
HOXD11-202ENST00000498438 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
HOXD11-202ENST00000498438 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
HOXD11-202ENST00000498438 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 ZNF124Q15973 351 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 WFDC3Q8IUB2 231 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 MS4A6AQ9H2W1 248 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 MAP6D1Q9H9H5 199 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 FLVCR2Q9UPI3 526 aa13.62□□□□□ -0.23
HOXD11-202ENST00000498438 A0A1W2PS18 150 aa13.61□□□□□ -0.23
HOXD11-202ENST00000498438 DNASE2O00115 360 aaPredicted RBP13.61□□□□□ -0.23
HOXD11-202ENST00000498438 HOXB5P09067 269 aa13.61□□□□□ -0.23
HOXD11-202ENST00000498438 IL7P13232 177 aa13.61□□□□□ -0.23
HOXD11-202ENST00000498438 BTCP35070 178 aa13.61□□□□□ -0.23
HOXD11-202ENST00000498438 Q8WTZ3 238 aa13.61□□□□□ -0.23
HOXD11-202ENST00000498438 NARS2Q96I59 477 aaKnown RBP13.61□□□□□ -0.23
HOXD11-202ENST00000498438 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
HOXD11-202ENST00000498438 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
HOXD11-202ENST00000498438 P2RY1P47900 373 aa13.6□□□□□ -0.23
HOXD11-202ENST00000498438 CMC4P56277 68 aaPredicted RBP13.6□□□□□ -0.23
HOXD11-202ENST00000498438 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
HOXD11-202ENST00000498438 DEFB135Q30KP9 77 aa13.6□□□□□ -0.23
HOXD11-202ENST00000498438 GGNBP1Q5YKI7 109 aa13.6□□□□□ -0.23
HOXD11-202ENST00000498438 TRAV2A0A0B4J234 112 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 KIR2DL5BA0A0G2JN68 375 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 KIR2DL5BA0A0G2JPC4 375 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 CENPXA8MT69 81 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 IL4P05112 153 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 HNRNPCP07910 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
HOXD11-202ENST00000498438 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
HOXD11-202ENST00000498438 KIR2DL5AQ8N109 375 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 FAM24BQ8N5W8 94 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 C7orf50Q9BRJ6 194 aaKnown RBP13.59□□□□□ -0.23
HOXD11-202ENST00000498438 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 RABAC1Q9UI14 185 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 U3KQE9 123 aa13.59□□□□□ -0.23
HOXD11-202ENST00000498438 UBE2CO00762 179 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 MED6O75586 246 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 TOMM40O96008 361 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 DHRS2Q13268 280 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 Q6ZWC4 215 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 STPG3Q8N7X2 389 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 STXBP6Q8NFX7 210 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 GRAMD2BQ96HH9 432 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 SLC35E1Q96K37 410 aa13.58□□□□□ -0.24
HOXD11-202ENST00000498438 PAIP2BQ9ULR5 123 aaKnown RBP13.58□□□□□ -0.24
HOXD11-202ENST00000498438 TENM2Q9NT68 2774 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 SPRY2O43597 315 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 SYNGR2O43760 224 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 ADAP1O75689 374 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 OR4E1P0C645 316 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 RD3LP0DJH9 198 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 ANXA7P20073 488 aaKnown RBP13.57□□□□□ -0.24
HOXD11-202ENST00000498438 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
HOXD11-202ENST00000498438 RAB11AP62491 216 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 GAMTQ14353 236 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 LYG2Q86SG7 212 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 COQ8AQ8NI60 647 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
HOXD11-202ENST00000498438 TP53TG1Q9Y2A0 90 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 LYSTQ99698 3801 aa13.57□□□□□ -0.24
HOXD11-202ENST00000498438 WRBO00258 174 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 PSG1P11464 419 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 DEFB131AP59861 70 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 C4orf46Q504U0 113 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 GLMPQ8WWB7 406 aa13.56□□□□□ -0.24
HOXD11-202ENST00000498438 IGKV1D-37A0A075B6S9 117 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms