RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 HEYLQ9NQ87 328 aaPredicted RBP13.22□□□□□ -0.29
ATPAF2-209ENST00000497871 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 OR5AC1P0C628 307 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 IGLC1P0CG04 106 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 SLC25A4P12235 298 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 HLA-DMBP28068 263 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 DHRS2Q13268 280 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 C2orf83Q53S99 150 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 PRSS54Q6PEW0 395 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 CSNK1G2-AS1Q8NCQ2 148 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 RTBDNQ9BSG5 229 aaPredicted RBP13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 X6R8D5 127 aa13.21□□□□□ -0.29
ATPAF2-209ENST00000497871 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 GABARAPO95166 117 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 HNRNPCP07910 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 C4BPBP20851 252 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 DHODHQ02127 395 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 SSBP1Q04837 148 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 C16orf54Q6UWD8 224 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 SELENOHQ8IZQ5 122 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 RBPMSQ93062 196 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 RAB40CQ96S21 281 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 KRTAP17-1Q9BYP8 105 aa13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 NAA50Q9GZZ1 169 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-209ENST00000497871 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 OR10J1P30954 320 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 RND2P52198 227 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 MEF2DQ14814 521 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 GLMPQ8WWB7 406 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 GPR146Q96CH1 333 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 DNAH6Q9C0G6 4158 aa13.19□□□□□ -0.3
ATPAF2-209ENST00000497871 AGRNO00468 2067 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 MRPS10P82664 201 aaKnown RBP13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 PSMG4Q5JS54 123 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 Q6ZTC4 211 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 SLC24A4Q8NFF2 622 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
ATPAF2-209ENST00000497871 CEBPZOSA8MTT3 80 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 NUTF2P61970 127 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 GPR107Q5VW38 600 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 TMEM268Q5VZI3 342 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 NOXA1Q86UR1 476 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 TMEM56-RWDD3S4R434 201 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 HECTD4Q9Y4D8 3996 aa13.17□□□□□ -0.3
ATPAF2-209ENST00000497871 BUB3O43684 328 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 IL4P05112 153 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 FAAP20Q6NZ36 180 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 TMEM170AQ8WVE7 144 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 C1QTNF4Q9BXJ3 329 aa13.16□□□□□ -0.3
ATPAF2-209ENST00000497871 IGHV4-4A0A075B6R2 117 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 RGS5O15539 181 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 TOMM40O96008 361 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 RNF126Q9BV68 326 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
ATPAF2-209ENST00000497871 CTDSP2O14595 271 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 GSTZ1O43708 216 aaPredicted RBP13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 NXPH3O95157 252 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 NPY1RP25929 384 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 SIGLEC15Q6ZMC9 328 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 U3KQ87 197 aa13.14□□□□□ -0.31
ATPAF2-209ENST00000497871 H3BMM0 161 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 C12orf74Q32Q52 190 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 PRRT1Q99946 306 aa13.13□□□□□ -0.31
ATPAF2-209ENST00000497871 DEFB131BA0A096LNP1 70 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 CTDSPLO15194 276 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 IFNA10P01566 189 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 SMIM18P0DKX4 95 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 PSG1P11464 419 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
ATPAF2-209ENST00000497871 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms