RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TMED4Q7Z7H5 227 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 CCDC190Q86UF4 302 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 NARS2Q96I59 477 aaKnown RBP11.64□□□□□ -0.55
HDAC4-213ENST00000496347 SLC25A21Q9BQT8 299 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-213ENST00000496347 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 PRR13Q9NZ81 148 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 U3KQ87 197 aa11.64□□□□□ -0.55
HDAC4-213ENST00000496347 DFFBO76075 338 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 NPPCP23582 126 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 CRYBB3P26998 211 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 OR10J1P30954 320 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 TFPI2P48307 235 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 RND2P52198 227 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-213ENST00000496347 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 TMEM170AQ8WVE7 144 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
HDAC4-213ENST00000496347 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 SPRY2O43597 315 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 NXPH3O95157 252 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-213ENST00000496347 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-213ENST00000496347 TIGITQ495A1 244 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 LRTM2Q8N967 370 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
HDAC4-213ENST00000496347 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 IFNA10P01566 189 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 SLC25A6P12236 298 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 RPL35AP18077 110 aaKnown RBP11.61□□□□□ -0.55
HDAC4-213ENST00000496347 VAMP1P23763 118 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 P2RY1P47900 373 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
HDAC4-213ENST00000496347 RPL11P62913 178 aaKnown RBP11.61□□□□□ -0.55
HDAC4-213ENST00000496347 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
HDAC4-213ENST00000496347 MLANAQ16655 118 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 APRG1Q8IVJ8 170 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 GBGT1Q8N5D6 347 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 RNF183Q96D59 192 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 SRRQ9GZT4 340 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
HDAC4-213ENST00000496347 DNASE2O00115 360 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-213ENST00000496347 ATF4P18848 351 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-213ENST00000496347 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
HDAC4-213ENST00000496347 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
HDAC4-213ENST00000496347 RBKSQ9H477 322 aa11.6□□□□□ -0.55
HDAC4-213ENST00000496347 HELTA6NFD8 242 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 PITX3O75364 302 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 JTBO76095 146 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 TOMM40O96008 361 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 UBE2MP61081 183 aaKnown RBP11.59□□□□□ -0.55
HDAC4-213ENST00000496347 TRIQKQ629K1 86 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 CENPSQ8N2Z9 138 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 TMEM217Q8N7C4 229 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 Q8WTZ3 238 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 RABAC1Q9UI14 185 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 TMED3Q9Y3Q3 217 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
HDAC4-213ENST00000496347 MPTX1A8MV57 137 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC4-213ENST00000496347 NUP62P37198 522 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-213ENST00000496347 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 ZNF124Q15973 351 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 STXBP6Q8NFX7 210 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 NPIPB3Q92617 1050 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 U3KQE9 123 aa11.58□□□□□ -0.56
HDAC4-213ENST00000496347 A0A0J9YWU9 116 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 K7EQG2 157 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 MED6O75586 246 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 SFT2D2O95562 160 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 IFNA4P05014 189 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 IL4P05112 153 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 RD3LP0DJH9 198 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 INPP1P49441 399 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-213ENST00000496347 GLMPQ8WWB7 406 aa11.57□□□□□ -0.56
HDAC4-213ENST00000496347 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-213ENST00000496347 FABP1P07148 127 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-213ENST00000496347 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-213ENST00000496347 DEFB131AP59861 70 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 SLC35E1Q96K37 410 aa11.56□□□□□ -0.56
HDAC4-213ENST00000496347 AGRNO00468 2067 aa11.55□□□□□ -0.56
HDAC4-213ENST00000496347 NUPR2A6NF83 97 aa11.55□□□□□ -0.56
HDAC4-213ENST00000496347 NDUFB6O95139 128 aa11.55□□□□□ -0.56
HDAC4-213ENST00000496347 CA1P00915 261 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-213ENST00000496347 PLECQ15149 4684 aaKnown RBP11.55□□□□□ -0.56
HDAC4-213ENST00000496347 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
HDAC4-213ENST00000496347 OR51G1Q8NGK1 321 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms