RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PRB3Q04118 309 aaPredicted RBP8.87□□□□□ -0.99
CMSS1-208ENST00000496116 OR1B1Q8NGR6 318 aa8.87□□□□□ -0.99
CMSS1-208ENST00000496116 OR5R1Q8NH85 324 aa8.87□□□□□ -0.99
CMSS1-208ENST00000496116 NEU4Q8WWR8 484 aaPredicted RBP8.87□□□□□ -0.99
CMSS1-208ENST00000496116 CDC42EP3Q9UKI2 254 aa8.87□□□□□ -0.99
CMSS1-208ENST00000496116 F11RQ9Y624 299 aaKnown RBP8.87□□□□□ -0.99
CMSS1-208ENST00000496116 LY6LH3BQJ8 138 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 MOSP00540 346 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 PYYP10082 97 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 ORM2P19652 201 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 HTR1DP28221 377 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 LGALS4P56470 323 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
CMSS1-208ENST00000496116 CDSNQ15517 529 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 IBA57Q5T440 356 aaKnown RBP8.86□□□□□ -0.99
CMSS1-208ENST00000496116 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
CMSS1-208ENST00000496116 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
CMSS1-208ENST00000496116 FBXL15Q9H469 300 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 PLXNB1O43157 2135 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 SPTA1P02549 2419 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 TRBV9A0A0B4J1U6 114 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 C22orf46C9J442 243 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 APELAP0DMC3 54 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 MGST1P10620 155 aaKnown RBP8.86□□□□□ -0.99
CMSS1-208ENST00000496116 CEACAM3P40198 252 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 MFAP2P55001 183 aa8.86□□□□□ -0.99
CMSS1-208ENST00000496116 TEX22C9J3V5 150 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 M0R1W7 72 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 HYPMO75409 117 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 ADMP35318 185 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 COX19Q49B96 90 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 TPTE2P1Q5T6R2 138 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 OR1L6Q8NGR2 347 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 FXYD5Q96DB9 178 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 RNASE7Q9H1E1 156 aaKnown RBP8.85□□□□□ -0.99
CMSS1-208ENST00000496116 PRDM13Q9H4Q3 707 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 DPM3Q9P2X0 92 aa8.85□□□□□ -0.99
CMSS1-208ENST00000496116 PEX7O00628 323 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 LY6HO94772 140 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 CNIH1O95406 144 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 CBLN1P23435 193 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 ARF6P62330 175 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 MMDQ15546 238 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 C11orf71Q6IPW1 123 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 OR8I2Q8N0Y5 310 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 GBGT1Q8N5D6 347 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 SSBP3Q9BWW4 388 aaPredicted RBP8.84□□□□□ -0.99
CMSS1-208ENST00000496116 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
CMSS1-208ENST00000496116 LOC105371242A0A075B767 164 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 FCN1O00602 326 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 TIMM23O14925 209 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 MT-ND6P03923 174 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 PLP1P60201 277 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 CX3CL1P78423 397 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 WDR73Q6P4I2 378 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 GNB1LQ9BYB4 327 aa8.84□□□□□ -0.99
CMSS1-208ENST00000496116 TPRP12270 2363 aaKnown RBP8.84□□□□□ -1
CMSS1-208ENST00000496116 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 ZNF705GA8MUZ8 300 aaPredicted RBP8.83□□□□□ -1
CMSS1-208ENST00000496116 SNURFLB1AK76 121 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 TSTD3H0UI37 97 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 RD3LP0DJH9 198 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 IER3P46695 156 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 RUSC1-AS1Q66K80 236 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 C19orf35Q6ZS72 473 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 ABCA4P78363 2273 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 NBR2O15453 112 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 GZMBP10144 247 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 PKIAP61925 76 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 UBE2G1P62253 170 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 RANP62826 216 aaKnown RBP8.83□□□□□ -1
CMSS1-208ENST00000496116 FXYD3Q14802 87 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 BAGE2Q86Y30 109 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 CHRDL1Q9BU40 450 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 HILPDAQ9Y5L2 63 aa8.83□□□□□ -1
CMSS1-208ENST00000496116 SMIM27A0A1W2PRY6 76 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 SLC25A5P05141 298 aaKnown RBP8.82□□□□□ -1
CMSS1-208ENST00000496116 NBEAP1P0C6P0 100 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 CRISP2P16562 243 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 PRTN3P24158 256 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 MYCNOSP40205 109 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 GPR6P46095 362 aaPredicted RBP8.82□□□□□ -1
CMSS1-208ENST00000496116 FAM231DQ6ZW35 169 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 BLNKQ8WV28 456 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 SMIM12Q96EX1 92 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 WNT10AQ9GZT5 417 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 HIGD1AQ9Y241 93 aa8.82□□□□□ -1
CMSS1-208ENST00000496116 PGPA6NDG6 321 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 I3L2K1 104 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 IGLC1P0CG04 106 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 SFTPCP11686 197 aa8.81□□□□□ -1
CMSS1-208ENST00000496116 TMEM183BQ1AE95 376 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms