RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 IGKV1-17P01599 117 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 CRYBB3P26998 211 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 TNFRSF9Q07011 255 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 OR1S2Q8NGQ3 325 aa17.92■□□□□ 0.46
HLA-C-209ENST00000495835 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
HLA-C-209ENST00000495835 APOHP02749 345 aaPredicted RBP17.91■□□□□ 0.46
HLA-C-209ENST00000495835 NPY1RP25929 384 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 YPEL3P61236 119 aaPredicted RBP17.91■□□□□ 0.46
HLA-C-209ENST00000495835 PRSS54Q6PEW0 395 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 LYZL2Q7Z4W2 148 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 CCDC190Q86UF4 302 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 RNF183Q96D59 192 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 RBM38Q9H0Z9 239 aaKnown RBP17.91■□□□□ 0.46
HLA-C-209ENST00000495835 MS4A6AQ9H2W1 248 aa17.91■□□□□ 0.46
HLA-C-209ENST00000495835 DNASE2O00115 360 aaPredicted RBP17.9■□□□□ 0.46
HLA-C-209ENST00000495835 ATF4P18848 351 aaPredicted RBP17.9■□□□□ 0.46
HLA-C-209ENST00000495835 ZNF79Q15937 498 aa17.9■□□□□ 0.46
HLA-C-209ENST00000495835 APRG1Q8IVJ8 170 aa17.9■□□□□ 0.46
HLA-C-209ENST00000495835 Q8WTZ3 238 aa17.9■□□□□ 0.46
HLA-C-209ENST00000495835 IGKV3-7A0A075B6H7 116 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 IGLC1P0CG04 106 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 TFPI2P48307 235 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 LILRB2Q8N423 598 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 GBGT1Q8N5D6 347 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 TMEM170AQ8WVE7 144 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 GRAMD2BQ96HH9 432 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 CSTL1Q9H114 145 aa17.89■□□□□ 0.45
HLA-C-209ENST00000495835 OR10J1P30954 320 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 RND2P52198 227 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 DEFB135Q30KP9 77 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 TIGITQ495A1 244 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 LRTM2Q8N967 370 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 DTD1Q8TEA8 209 aa17.88■□□□□ 0.45
HLA-C-209ENST00000495835 IFNA10P01566 189 aa17.87■□□□□ 0.45
HLA-C-209ENST00000495835 SLC25A6P12236 298 aa17.87■□□□□ 0.45
HLA-C-209ENST00000495835 RPL35AP18077 110 aaKnown RBP17.87■□□□□ 0.45
HLA-C-209ENST00000495835 EIF2B2P49770 351 aaKnown RBP17.87■□□□□ 0.45
HLA-C-209ENST00000495835 RPL11P62913 178 aaKnown RBP17.87■□□□□ 0.45
HLA-C-209ENST00000495835 SPANXN2Q5MJ10 180 aa17.87■□□□□ 0.45
HLA-C-209ENST00000495835 PRR13Q9NZ81 148 aa17.87■□□□□ 0.45
HLA-C-209ENST00000495835 U3KQE9 123 aa17.87■□□□□ 0.45
HLA-C-209ENST00000495835 MPTX1A8MV57 137 aa17.86■□□□□ 0.45
HLA-C-209ENST00000495835 TMED4Q7Z7H5 227 aa17.86■□□□□ 0.45
HLA-C-209ENST00000495835 GATAD1Q8WUU5 269 aa17.86■□□□□ 0.45
HLA-C-209ENST00000495835 RBKSQ9H477 322 aa17.86■□□□□ 0.45
HLA-C-209ENST00000495835 IGHV3-66A0A0C4DH42 116 aa17.85■□□□□ 0.45
HLA-C-209ENST00000495835 P2RY1P47900 373 aa17.85■□□□□ 0.45
HLA-C-209ENST00000495835 AP2S1P53680 142 aaPredicted RBP17.85■□□□□ 0.45
HLA-C-209ENST00000495835 OR1S1Q8NH92 325 aa17.85■□□□□ 0.45
HLA-C-209ENST00000495835 DNAH1Q9P2D7 4330 aa17.85■□□□□ 0.45
HLA-C-209ENST00000495835 HELTA6NFD8 242 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 FAM90A26D6RGX4 464 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 PITX3O75364 302 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 JTBO76095 146 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 HNRNPCP07910 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
HLA-C-209ENST00000495835 GPX4P36969 197 aaPredicted RBP17.84■□□□□ 0.45
HLA-C-209ENST00000495835 LYG2Q86SG7 212 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 TMEM217Q8N7C4 229 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 NPIPB3Q92617 1050 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 TMED3Q9Y3Q3 217 aa17.84■□□□□ 0.45
HLA-C-209ENST00000495835 NXPH3O95157 252 aa17.83■□□□□ 0.44
HLA-C-209ENST00000495835 TOMM40O96008 361 aa17.83■□□□□ 0.44
HLA-C-209ENST00000495835 UBE2MP61081 183 aaKnown RBP17.83■□□□□ 0.44
HLA-C-209ENST00000495835 ZNF124Q15973 351 aa17.83■□□□□ 0.44
HLA-C-209ENST00000495835 RABAC1Q9UI14 185 aa17.83■□□□□ 0.44
HLA-C-209ENST00000495835 PLECQ15149 4684 aaKnown RBP17.83■□□□□ 0.44
HLA-C-209ENST00000495835 A0A0J9YWU9 116 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 K7EQG2 157 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 RD3LP0DJH9 198 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 VAMP1P23763 118 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 DEFB131AP59861 70 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 RBMS2Q15434 407 aaKnown RBP17.82■□□□□ 0.44
HLA-C-209ENST00000495835 SRRQ9GZT4 340 aa17.82■□□□□ 0.44
HLA-C-209ENST00000495835 NAP1L6A6NFF2 107 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 MED6O75586 246 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 SFT2D2O95562 160 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 IFNA4P05014 189 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 C16orf54Q6UWD8 224 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 CENPSQ8N2Z9 138 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 ACY3Q96HD9 319 aa17.81■□□□□ 0.44
HLA-C-209ENST00000495835 IL4P05112 153 aa17.8■□□□□ 0.44
HLA-C-209ENST00000495835 RAB11AP62491 216 aa17.8■□□□□ 0.44
HLA-C-209ENST00000495835 STXBP6Q8NFX7 210 aa17.8■□□□□ 0.44
HLA-C-209ENST00000495835 DCANP1Q8TF63 244 aa17.8■□□□□ 0.44
HLA-C-209ENST00000495835 CIB3Q96Q77 187 aaPredicted RBP17.8■□□□□ 0.44
HLA-C-209ENST00000495835 SEPSECSQ9HD40 501 aaKnown RBP17.8■□□□□ 0.44
HLA-C-209ENST00000495835 PFDN2Q9UHV9 154 aa17.8■□□□□ 0.44
HLA-C-209ENST00000495835 NUP62P37198 522 aaPredicted RBP17.79■□□□□ 0.44
HLA-C-209ENST00000495835 TMEM41BQ5BJD5 291 aa17.79■□□□□ 0.44
HLA-C-209ENST00000495835 STHQ8IWL8 128 aa17.79■□□□□ 0.44
HLA-C-209ENST00000495835 GLMPQ8WWB7 406 aa17.79■□□□□ 0.44
HLA-C-209ENST00000495835 FABP1P07148 127 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 INPP1P49441 399 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 RPP30P78346 268 aaKnown RBP17.78■□□□□ 0.44
HLA-C-209ENST00000495835 PPP1R1AQ13522 171 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 USF2Q15853 346 aaPredicted RBP17.78■□□□□ 0.44
HLA-C-209ENST00000495835 FAM24BQ8N5W8 94 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 OR51G1Q8NGK1 321 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 SLC35E1Q96K37 410 aa17.78■□□□□ 0.44
HLA-C-209ENST00000495835 RARRES2Q99969 163 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms