RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 DEDDO75618 318 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 IGLC1P0CG04 106 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 AKAIN1P0CW23 69 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 SPP1P10451 314 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 OR10J1P30954 320 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 PRSS54Q6PEW0 395 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 TRPT1Q86TN4 253 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 OR4C16Q8NGL9 310 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 PRRT1Q99946 306 aa13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 MRPS26Q9BYN8 205 aaKnown RBP13.43□□□□□ -0.26
CLCNKA-207ENST00000495784 CRYM-AS1A6NIL9 109 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 IL18Q14116 193 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 SPCS2Q15005 226 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 ACTL10Q5JWF8 245 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 C2CD4CQ8TF44 421 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 DIRAS2Q96HU8 199 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 CACFD1Q9UGQ2 172 aa13.42□□□□□ -0.26
CLCNKA-207ENST00000495784 NXPH3O95157 252 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 HNRNPCP07910 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 DHRS2Q13268 280 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 NOXA1Q86UR1 476 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 Q8NAQ8 132 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 DCANP1Q8TF63 244 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 RABL2AQ9UBK7 228 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 RABL2BQ9UNT1 228 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 TMEM56-RWDD3S4R434 201 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 U3KQE9 123 aa13.41□□□□□ -0.26
CLCNKA-207ENST00000495784 CTDSPLO15194 276 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 GIG44P09565 113 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 SULT1A3P0DMM9 295 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 SULT1A4P0DMN0 295 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 NPY1RP25929 384 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 ALDH3B2P48448 385 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 AP2S1P53680 142 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 CLVS1Q8IUQ0 354 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 GLMPQ8WWB7 406 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 KCNIP3Q9Y2W7 256 aa13.4□□□□□ -0.26
CLCNKA-207ENST00000495784 IGHV4-28A0A0C4DH34 117 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 IL4P05112 153 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 MIFP14174 115 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 C4BPBP20851 252 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 TCTAP57738 103 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 PSMG4Q5JS54 123 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 TMEM170AQ8WVE7 144 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 IL22RA2Q969J5 263 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 KMT2AQ03164 3969 aa13.39□□□□□ -0.27
CLCNKA-207ENST00000495784 C11orf94C9JXX5 98 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 IFNA10P01566 189 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 NMSQ5H8A3 153 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 CENPSQ8N2Z9 138 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 SCGB3A2Q96PL1 93 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 RAB40CQ96S21 281 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 PRR13Q9NZ81 148 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 CCDC59Q9P031 241 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
CLCNKA-207ENST00000495784 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 IGLL5B9A064 214 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 GSTZ1O43708 216 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 RBMY1A1P0DJD3 496 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 RBMY1CP0DJD4 496 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 SNRPD3P62318 126 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 RBMY1FQ15415 496 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 RAB2BQ8WUD1 216 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 RSL24D1Q9UHA3 163 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-207ENST00000495784 ZNF705EA8MWA4 302 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 TOMM40O96008 361 aa13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 CCR6P51684 374 aa13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 NRN1Q9NPD7 142 aa13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 U3KQ87 197 aa13.36□□□□□ -0.27
CLCNKA-207ENST00000495784 AGRNO00468 2067 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 FRAS1Q86XX4 4008 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 A0A0B4J2A0 478 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 AKR1C4P17516 323 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 HLA-DMBP28068 263 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 SIGLEC15Q6ZMC9 328 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 LGI3Q8N145 548 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 DYNC2LI1Q8TCX1 351 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 DTD1Q8TEA8 209 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 SHPKQ9UHJ6 478 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 X6R8D5 127 aa13.35□□□□□ -0.27
CLCNKA-207ENST00000495784 BUB3O43684 328 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms