RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-245ENST00000494862 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 PSMB11A5LHX3 300 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 SCO1O75880 301 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 FSHBP01225 129 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
HDLBP-245ENST00000494862 ZNF90Q03938 601 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 KLK9Q2XQG4 91 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 SOHLH1Q5JUK2 328 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 FAM78BQ5VT40 261 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 SPATA31B1PQ5VZV4 182 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 TMEM219Q86XT9 240 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
HDLBP-245ENST00000494862 PFDN5Q99471 154 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 MRPL32Q9BYC8 188 aaKnown RBP9.05□□□□□ -0.96
HDLBP-245ENST00000494862 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
HDLBP-245ENST00000494862 DNAJC4Q9NNZ3 241 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
HDLBP-245ENST00000494862 THYN1Q9P016 225 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 PITPNC1Q9UKF7 332 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 KLK9Q9UKQ9 250 aa9.05□□□□□ -0.96
HDLBP-245ENST00000494862 H3BUX3 64 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 M0QZK8 103 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 ATP6V0E1O15342 81 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 CLN5O75503 358 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 SNAPINO95295 136 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 IGLC1P0CG04 106 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 ARL14EPLP0DKL9 152 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 MFAP4P55083 255 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 TAS2R45P59539 299 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 ATRAIDQ6UW56 229 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 SPNS3Q6ZMD2 512 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 C16orf82Q7Z2V1 217 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 IQCF2Q8IXL9 164 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 OR5T1Q8NG75 326 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 ZNF48Q96MX3 618 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-245ENST00000494862 ABCA12Q86UK0 2595 aa9.04□□□□□ -0.96
HDLBP-245ENST00000494862 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-245ENST00000494862 NDUFB8O95169 186 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 AMY1AP04745 511 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 FABP1P07148 127 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 C8orf88P0DMB2 117 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 GCHFRP30047 84 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 NPBWR1P48145 328 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 CRIP2P52943 208 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-245ENST00000494862 PLP1P60201 277 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 LY6EQ16553 131 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 AKIRIN2Q53H80 203 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 C9orf139Q6ZV77 190 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 TMEM37Q8WXS4 190 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-245ENST00000494862 NAV3Q8IVL0 2385 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 FBN2P35556 2912 aa9.03□□□□□ -0.96
HDLBP-245ENST00000494862 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
HDLBP-245ENST00000494862 PAGE4O60829 102 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 OR2J3O76001 311 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 CD81P60033 236 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 MEF2BQ02080 365 aaPredicted RBP9.02□□□□□ -0.97
HDLBP-245ENST00000494862 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 TIGITQ495A1 244 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 CYB561D1Q8N8Q1 229 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 CLRN3Q8NCR9 226 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 FOXC2Q99958 501 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 TXNDC17Q9BRA2 123 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 TMEM167BQ9NRX6 74 aa9.02□□□□□ -0.97
HDLBP-245ENST00000494862 CENPEQ02224 2701 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 LINC01548A6NM66 108 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 TMEM250H0YL14 139 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 HYPMO75409 117 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 IGKV1-17P01599 117 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 PSG1P11464 419 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
HDLBP-245ENST00000494862 C19orf54Q5BKX5 351 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 FAM90A2PQ658T7 463 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.01□□□□□ -0.971e-5■■■■□ 21.5
HDLBP-245ENST00000494862 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
HDLBP-245ENST00000494862 WFDC11Q8NEX6 87 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 SUN5Q8TC36 379 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 FAM167A-AS1Q96KT0 104 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 TXN2Q99757 166 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 GSX1Q9H4S2 264 aaPredicted RBP9.01□□□□□ -0.97
HDLBP-245ENST00000494862 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 DOK5Q9P104 306 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 FBXL7Q9UJT9 491 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 ARL2-SNX15V9GYD0 113 aa9.01□□□□□ -0.97
HDLBP-245ENST00000494862 TRBV9A0A0B4J1U6 114 aa9□□□□□ -0.97
HDLBP-245ENST00000494862 TRAV41A0A0B4J266 112 aa9□□□□□ -0.97
HDLBP-245ENST00000494862 MDFIC2A0A1B0GVS7 189 aa9□□□□□ -0.97
HDLBP-245ENST00000494862 C11orf94C9JXX5 98 aa9□□□□□ -0.97
HDLBP-245ENST00000494862 GNG7O60262 68 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms