RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 METTL26Q96S19 204 aa24.63■■□□□ 1.53
CBX4-203ENST00000494546 DFFBO76075 338 aa24.62■■□□□ 1.53
CBX4-203ENST00000494546 RPL35AP18077 110 aaKnown RBP24.62■■□□□ 1.53
CBX4-203ENST00000494546 OR1S2Q8NGQ3 325 aa24.62■■□□□ 1.53
CBX4-203ENST00000494546 OVOL2Q9BRP0 275 aa24.62■■□□□ 1.53
CBX4-203ENST00000494546 TMEM231Q9H6L2 316 aa24.62■■□□□ 1.53
CBX4-203ENST00000494546 U3KQ87 197 aa24.62■■□□□ 1.53
CBX4-203ENST00000494546 DUXBA0A1W2PPF3 345 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 IGLC1P0CG04 106 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 OR10J1P30954 320 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 PPP1R1AQ13522 171 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 TRIQKQ629K1 86 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 CENPSQ8N2Z9 138 aa24.61■■□□□ 1.53
CBX4-203ENST00000494546 CMC4P56277 68 aaPredicted RBP24.6■■□□□ 1.53
CBX4-203ENST00000494546 ZNF124Q15973 351 aa24.6■■□□□ 1.53
CBX4-203ENST00000494546 BAK1Q16611 211 aa24.6■■□□□ 1.53
CBX4-203ENST00000494546 ACY3Q96HD9 319 aa24.6■■□□□ 1.53
CBX4-203ENST00000494546 A0A1W2PS18 150 aa24.59■■□□□ 1.53
CBX4-203ENST00000494546 DNASE2O00115 360 aaPredicted RBP24.59■■□□□ 1.53
CBX4-203ENST00000494546 SFT2D2O95562 160 aa24.59■■□□□ 1.53
CBX4-203ENST00000494546 RBMS2Q15434 407 aaKnown RBP24.59■■□□□ 1.53
CBX4-203ENST00000494546 NPIPB3Q92617 1050 aa24.59■■□□□ 1.53
CBX4-203ENST00000494546 MS4A6AQ9H2W1 248 aa24.59■■□□□ 1.53
CBX4-203ENST00000494546 LRTM2Q8N967 370 aa24.58■■□□□ 1.53
CBX4-203ENST00000494546 Q8WTZ3 238 aa24.58■■□□□ 1.53
CBX4-203ENST00000494546 NARS2Q96I59 477 aaKnown RBP24.58■■□□□ 1.53
CBX4-203ENST00000494546 MAP6D1Q9H9H5 199 aa24.58■■□□□ 1.53
CBX4-203ENST00000494546 LINC00854A0A1B0GVQ3 168 aa24.57■■□□□ 1.52
CBX4-203ENST00000494546 IFNA4P05014 189 aa24.57■■□□□ 1.52
CBX4-203ENST00000494546 CRYBB3P26998 211 aa24.57■■□□□ 1.52
CBX4-203ENST00000494546 STPG3Q8N7X2 389 aa24.57■■□□□ 1.52
CBX4-203ENST00000494546 PITX3O75364 302 aa24.56■■□□□ 1.52
CBX4-203ENST00000494546 YPEL3P61236 119 aaPredicted RBP24.56■■□□□ 1.52
CBX4-203ENST00000494546 DEFB135Q30KP9 77 aa24.56■■□□□ 1.52
CBX4-203ENST00000494546 KIR2DL5BA0A0G2JN68 375 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 KIR2DL5BA0A0G2JPC4 375 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 NAP1L6A6NFF2 107 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 UBE2CO00762 179 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 P2RY1P47900 373 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 Q6ZWC4 215 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 KIR2DL5AQ8N109 375 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 KIR2DL5BQ8NHK3 375 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 RABAC1Q9UI14 185 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 TMED3Q9Y3Q3 217 aa24.55■■□□□ 1.52
CBX4-203ENST00000494546 SPRY2O43597 315 aa24.54■■□□□ 1.52
CBX4-203ENST00000494546 IL17DQ8TAD2 202 aa24.54■■□□□ 1.52
CBX4-203ENST00000494546 HOXB5P09067 269 aa24.53■■□□□ 1.52
CBX4-203ENST00000494546 IAPPP10997 89 aa24.53■■□□□ 1.52
CBX4-203ENST00000494546 SLC25A6P12236 298 aa24.53■■□□□ 1.52
CBX4-203ENST00000494546 GRAMD2BQ96HH9 432 aa24.53■■□□□ 1.52
CBX4-203ENST00000494546 SDHCQ99643 169 aaPredicted RBP24.53■■□□□ 1.52
CBX4-203ENST00000494546 ATP5IP56385 69 aaPredicted RBP24.52■■□□□ 1.52
CBX4-203ENST00000494546 STXBP6Q8NFX7 210 aa24.52■■□□□ 1.52
CBX4-203ENST00000494546 TP53TG1Q9Y2A0 90 aa24.52■■□□□ 1.52
CBX4-203ENST00000494546 TRAV2A0A0B4J234 112 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 NDUFB6O95139 128 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 IL4P05112 153 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 HNRNPCP07910 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
CBX4-203ENST00000494546 FAM24BQ8N5W8 94 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 NDUFA13Q9P0J0 144 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 FLVCR2Q9UPI3 526 aa24.51■■□□□ 1.51
CBX4-203ENST00000494546 TOMM40O96008 361 aa24.5■■□□□ 1.51
CBX4-203ENST00000494546 RD3LP0DJH9 198 aa24.5■■□□□ 1.51
CBX4-203ENST00000494546 DEFB131AP59861 70 aa24.5■■□□□ 1.51
CBX4-203ENST00000494546 UBE2MP61081 183 aaKnown RBP24.5■■□□□ 1.51
CBX4-203ENST00000494546 PAIP2BQ9ULR5 123 aaKnown RBP24.5■■□□□ 1.51
CBX4-203ENST00000494546 U3KQE9 123 aa24.5■■□□□ 1.51
CBX4-203ENST00000494546 FAM90A26D6RGX4 464 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 MED6O75586 246 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 USF2Q15853 346 aaPredicted RBP24.49■■□□□ 1.51
CBX4-203ENST00000494546 GGNBP1Q5YKI7 109 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 LEMD1Q68G75 181 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 SLC35E1Q96K37 410 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 MAGT1Q9H0U3 335 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 RYR3Q15413 4870 aa24.49■■□□□ 1.51
CBX4-203ENST00000494546 C9orf170A2RU37 121 aa24.48■■□□□ 1.51
CBX4-203ENST00000494546 CENPXA8MT69 81 aa24.48■■□□□ 1.51
CBX4-203ENST00000494546 GPX4P36969 197 aaPredicted RBP24.48■■□□□ 1.51
CBX4-203ENST00000494546 RNF183Q96D59 192 aa24.48■■□□□ 1.51
CBX4-203ENST00000494546 CSTL1Q9H114 145 aa24.48■■□□□ 1.51
CBX4-203ENST00000494546 RAB11AP62491 216 aa24.47■■□□□ 1.51
CBX4-203ENST00000494546 GAMTQ14353 236 aa24.47■■□□□ 1.51
CBX4-203ENST00000494546 PSG1P11464 419 aa24.46■■□□□ 1.51
CBX4-203ENST00000494546 IL7P13232 177 aa24.46■■□□□ 1.51
CBX4-203ENST00000494546 EIF2B2P49770 351 aaKnown RBP24.46■■□□□ 1.51
CBX4-203ENST00000494546 ZFP92A6NM28 416 aa24.45■■□□□ 1.5
CBX4-203ENST00000494546 MPTX1A8MV57 137 aa24.45■■□□□ 1.5
CBX4-203ENST00000494546 K7EQG2 157 aa24.45■■□□□ 1.5
CBX4-203ENST00000494546 SYNGR2O43760 224 aa24.45■■□□□ 1.5
CBX4-203ENST00000494546 C16orf54Q6UWD8 224 aa24.45■■□□□ 1.5
CBX4-203ENST00000494546 A0A0J9YWU9 116 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 HELTA6NFD8 242 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 WRBO00258 174 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 ADAP1O75689 374 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 BTCP35070 178 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 LYG2Q86SG7 212 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 OR51G1Q8NGK1 321 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 COQ8AQ8NI60 647 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 GLMPQ8WWB7 406 aa24.44■■□□□ 1.5
CBX4-203ENST00000494546 CIB3Q96Q77 187 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms