RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 OR2W1Q9Y3N9 320 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGLV5-37A0A075B6J1 123 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMED7-TICAM2A0A0A6YYA0 188 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 FBLL1A6NHQ2 334 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 E9PLD3 99 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 C11orf98E9PRG8 122 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 NPIPA3F8WFD2 350 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 M0QZ24 198 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 RS1O15537 224 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGLL1P15814 213 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 GPR183P32249 361 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CDC34P49427 236 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 NDUFA6P56556 154 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 UBE2D3P61077 147 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 UBE2D2P62837 147 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 Q6Q795 121 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 DUX4L9Q6RFH8 374 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 Q6ZR03 302 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 FAM220AQ7Z4H9 259 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF433Q8N7K0 673 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 FNDC9Q8TBE3 224 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 H1FXQ92522 213 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 RPUSD4Q96CM3 377 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 NKX3-1Q99801 234 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CCDC3Q9BQI4 270 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 HDHD3Q9BSH5 251 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 GGTLC1Q9BX51 225 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 EDA2RQ9HAV5 297 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 SPANXB1Q9NS25 103 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 SOX21Q9Y651 276 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CCL15-CCL14A0A0B4J2E2 113 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A0G2JNG1 304 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 MEIS3P1A6NDR6 274 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CORTO00230 105 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 NTN3O00634 580 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZG16O60844 167 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CLDN14O95500 239 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 RENP00797 406 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 SERPINA2P20848 420 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 BLVRBP30043 206 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 OPRM1P35372 400 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 GALR1P47211 349 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 GPR12P47775 334 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 FGF8P55075 233 aaPredicted RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 RPS21P63220 83 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 KIR2DS5Q14953 304 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CCL15Q16663 113 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 CXCL17Q6UXB2 119 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 MRPL21Q7Z2W9 205 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 COMMD2Q86X83 199 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 DEFB123Q8N688 67 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 GATAD1Q8WUU5 269 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 MAFIPQ8WZ33 124 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 LHX4Q969G2 390 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 OXGR1Q96P68 337 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 HINT2Q9BX68 163 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 TTTY10Q9BZA0 68 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 NXF5Q9H1B4 397 aaKnown RBP1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR2D2Q9H210 308 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 UBTD1Q9HAC8 227 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 C22orf24Q9Y442 160 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 INSIG2Q9Y5U4 225 aa1.97□□□□□ -2.09
CDC42EP3-205ENST00000494083 DCHS2Q6V1P9 2916 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 TRBV7-3A0A075B6L6 115 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGKV1OR2-108A0A075B7D4 117 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 BORCS7-ASMTA0A0B4J1R7 106 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGHV1OR15-9A0A0B4J2B8 117 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGHV1-24A0A0C4DH33 117 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A1W2PR80 420 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IZUMO1RA6ND01 250 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR11H12B2RN74 326 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 M0R036 132 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 SH2D1BO14796 132 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 AGPAT2O15120 278 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 SNAI2O43623 268 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 PVRP15151 417 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 NKX2-1P43699 371 aaPredicted RBP1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 FUT6P51993 359 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 C5orf47Q569G3 176 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 C9orf139Q6ZV77 190 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 MOB1BQ7L9L4 216 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 H2BFWTQ7Z2G1 175 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 Q8IYB0 196 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR11H1Q8NG94 326 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR9G4Q8NGQ1 327 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR5C1Q8NGR4 320 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR2T10Q8NGZ9 312 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR11H2Q8NH07 326 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 RTN4IP1Q8WWV3 396 aaPredicted RBP1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 CACNG8Q8WXS5 425 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 NRGNQ92686 78 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 FAM104AQ969W3 186 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF488Q96MN9 340 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 PRO1933Q9H354 126 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IDI2-AS1Q9NZ38 188 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IL36RNQ9UBH0 155 aa1.96□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGHV1-45A0A0A0MS14 117 aa1.96□□□□□ -2.1
CDC42EP3-205ENST00000494083 FAM24AA6NFZ4 105 aa1.96□□□□□ -2.1
CDC42EP3-205ENST00000494083 LRRC30A6NM36 301 aa1.96□□□□□ -2.1
CDC42EP3-205ENST00000494083 GGTLC3B5MD39 225 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms