RNA–Protein interactions for RNA: ENST00000493947.5

ZNF655-223, Transcript of zinc finger protein 655, human

TSL 4

Gene ZNF655, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF655-223	ENST00000493947	GABARAP	H6UMI1	98 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	SPP1	P10451	314 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	HTR2B	P41595	481 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	SCGB2B2	Q4G0G5	96 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	C2orf83	Q53S99	150 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	MORN3	Q6PF18	240 aa	Predicted RBP	12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	SELENOH	Q8IZQ5	122 aa	Known RBP	12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	TMEM230	Q96A57	120 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	ENY2	Q9NPA8	101 aa		12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.02	□□□□□ -0.49
ZNF655-223	ENST00000493947	TRAV30	A0A087WSZ9	112 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	ELOA3C	A0A087WX78	387 aa	Predicted RBP	12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	NXPH3	O95157	252 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	MIF	P14174	115 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	RND2	P52198	227 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	TMEM41B	Q5BJD5	291 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	C16orf54	Q6UWD8	224 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	RBPMS	Q93062	196 aa	Known RBP	12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	GPR146	Q96CH1	333 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	NAA60	Q9H7X0	242 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	KIAA1109	Q2LD37	5005 aa		12.01	□□□□□ -0.49
ZNF655-223	ENST00000493947	DNAH17	Q9UFH2	4485 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	C11orf94	C9JXX5	98 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	YPEL3	P61236	119 aa	Predicted RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	SSBP1	Q04837	148 aa	Known RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	USF2	Q15853	346 aa	Predicted RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	ACTL10	Q5JWF8	245 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	OR1S2	Q8NGQ3	325 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	RNASE11	Q8TAA1	199 aa	Known RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	RNASEH2C	Q8TDP1	164 aa	Known RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	C15orf40	Q8WUR7	153 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	HEYL	Q9NQ87	328 aa	Predicted RBP	12	□□□□□ -0.49
ZNF655-223	ENST00000493947	CACNG5	Q9UF02	275 aa		12	□□□□□ -0.49
ZNF655-223	ENST00000493947	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	CRYM-AS1	A6NIL9	109 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	IGLL5	B9A064	214 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	HLA-DMB	P28068	263 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	DHODH	Q02127	395 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	MEF2D	Q14814	521 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	SURF2	Q15527	256 aa	Predicted RBP	11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	GPR107	Q5VW38	600 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947		Q6ZTC4	211 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	SLC24A4	Q8NFF2	622 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	SMIM4	Q8WVI0	70 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	RAB40C	Q96S21	281 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	CLEC5A	Q9NY25	188 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	GPR132	Q9UNW8	380 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	TMEM56-RWDD3	S4R434	201 aa		11.99	□□□□□ -0.49
ZNF655-223	ENST00000493947	CTDSP2	O14595	271 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	SCGB2A1	O75556	95 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	1e-6	■□□□□ 8.8
ZNF655-223	ENST00000493947	SLC25A4	P12235	298 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	OR10J1	P30954	320 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	MRPS10	P82664	201 aa	Known RBP	11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	DHRS2	Q13268	280 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	NMS	Q5H8A3	153 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	OR4C16	Q8NGL9	310 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	NARS2	Q96I59	477 aa	Known RBP	11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	CELA1	Q9UNI1	258 aa		11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	C14orf166	Q9Y224	244 aa	Known RBP	11.98	□□□□□ -0.49
ZNF655-223	ENST00000493947	HELT	A6NFD8	242 aa		11.97	□□□□□ -0.49
ZNF655-223	ENST00000493947	FAM90A26	D6RGX4	464 aa		11.97	□□□□□ -0.49
ZNF655-223	ENST00000493947	PSMG4	Q5JS54	123 aa		11.97	□□□□□ -0.49
ZNF655-223	ENST00000493947	TMEM268	Q5VZI3	342 aa		11.97	□□□□□ -0.49
ZNF655-223	ENST00000493947		Q8WTZ3	238 aa		11.97	□□□□□ -0.49
ZNF655-223	ENST00000493947	BUB3	O43684	328 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	IL4	P05112	153 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	SPCS2	Q15005	226 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	NPIPB3	Q92617	1050 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	SEPSECS	Q9HD40	501 aa	Known RBP	11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	PRR13	Q9NZ81	148 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	TBC1D24	Q9ULP9	559 aa		11.96	□□□□□ -0.49
ZNF655-223	ENST00000493947	PKD1	P98161	4303 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	IGHV4-4	A0A075B6R2	117 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	TRAV10	A0A0B4J240	114 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	CEBPZOS	A8MTT3	80 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	CTDSPL	O15194	276 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	TOMM40	O96008	361 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	AKAIN1	P0CW23	69 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	NPY1R	P25929	384 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	ALDH3B2	P48448	385 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	EIF2B2	P49770	351 aa	Known RBP	11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	AP2S1	P53680	142 aa	Predicted RBP	11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	NRN1	Q9NPD7	142 aa		11.95	□□□□□ -0.5
ZNF655-223	ENST00000493947	DISC1	C4P0D8	188 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947		H3BMM0	161 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	RGS5	O15539	181 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	PSG1	P11464	419 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	SUPT4H1	P63272	117 aa	Known RBP	11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	C12orf74	Q32Q52	190 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	SIGLEC15	Q6ZMC9	328 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	OR51S1	Q8NGJ8	323 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	IL22RA2	Q969J5	263 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	ACY3	Q96HD9	319 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	HSPB7	Q9UBY9	170 aa		11.94	□□□□□ -0.5
ZNF655-223	ENST00000493947	ANKRD20A5P	A0PJZ0	165 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	RD3L	P0DJH9	198 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	SULT1A3	P0DMM9	295 aa		11.93	□□□□□ -0.5
ZNF655-223	ENST00000493947	SULT1A4	P0DMN0	295 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms