RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 GALR1P47211 349 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 KRTDAPP60985 99 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 Q0VG73 95 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 PMVKQ15126 192 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 BCDIN3DQ7Z5W3 292 aaKnown RBP9.51□□□□□ -0.89
BRCA1-222ENST00000493919 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 GNPNAT1Q96EK6 184 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-222ENST00000493919 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 CELSR1Q9NYQ6 3014 aa9.51□□□□□ -0.89
BRCA1-222ENST00000493919 A0A1W2PP11 408 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 DUXBA0A1W2PPF3 345 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 CA1P00915 261 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-222ENST00000493919 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
BRCA1-222ENST00000493919 RND3P61587 244 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF146Q15072 292 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 MEIG1Q5JSS6 88 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 TMEM219Q86XT9 240 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 FBXL14Q8N1E6 418 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 GCSAMQ8N6F7 178 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 GJC3Q8NFK1 279 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 NAA38Q9BRA0 125 aaKnown RBP9.5□□□□□ -0.89
BRCA1-222ENST00000493919 CDIP1Q9H305 208 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 DSCAMO60469 2012 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 A0A1W2PPM0 123 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 A0A1W2PRF3 423 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 A0A1W2PRM7 423 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 IGHA1P01876 353 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 MRPL3P09001 348 aaKnown RBP9.5□□□□□ -0.89
BRCA1-222ENST00000493919 ICAM4Q14773 271 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 C1QL2Q7Z5L3 287 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 SLC25A42Q86VD7 318 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 NUP37Q8NFH4 326 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 TMEM171Q8WVE6 324 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 JMJD8Q96S16 334 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 MRPL32Q9BYC8 188 aaKnown RBP9.5□□□□□ -0.89
BRCA1-222ENST00000493919 CST11Q9H112 138 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 FZR1Q9UM11 496 aa9.5□□□□□ -0.89
BRCA1-222ENST00000493919 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 TMEM89A2RUT3 159 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-222ENST00000493919 NUPR1O60356 82 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 ARL6IP5O75915 188 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 HBE1P02100 147 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 PRH1P02810 166 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 GPX1P07203 203 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 CSN3P07498 182 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 RPL12P30050 165 aaKnown RBP9.49□□□□□ -0.89
BRCA1-222ENST00000493919 REG1BP48304 166 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 EWSR1Q01844 656 aaKnown RBP eCLIP9.49□□□□□ -0.89
BRCA1-222ENST00000493919 OR5H2Q8NGV7 314 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 OR1F12Q8NHA8 337 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 C18orf32Q8TCD1 76 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 CHST6Q9GZX3 395 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 IDI2-AS1Q9NZ38 188 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF257Q9Y2Q1 563 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
BRCA1-222ENST00000493919 DHRS3O75911 302 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 SLC25A34Q6PIV7 304 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 KIR3DL3Q8N743 410 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 DDB2Q92466 427 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 RARRES2Q99969 163 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 AGMATQ9BSE5 352 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 TM2D1Q9BX74 207 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 COMMD5Q9GZQ3 224 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 K7N7A8 449 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 ISLRO14498 428 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 OR2H2O95918 312 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 IFITM1P13164 125 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-222ENST00000493919 PRR31Q5SQ13 230 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 IL17RELQ6ZVW7 336 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF502Q8TBZ5 544 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF442Q9H7R0 627 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 BEX4Q9NWD9 120 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-222ENST00000493919 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
BRCA1-222ENST00000493919 MYO9AB2RTY4 2548 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 RTTNQ86VV8 2226 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 H0YIZ8 118 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 RPEL1Q2QD12 228 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 HLA-DRB5Q30154 266 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF322Q6U7Q0 402 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-222ENST00000493919 APRG1Q8IVJ8 170 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 C4orf45Q96LM5 186 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 HSD17B10Q99714 261 aaKnown RBP9.47□□□□□ -0.89
BRCA1-222ENST00000493919 TTTY10Q9BZA0 68 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 INSIG2Q9Y5U4 225 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
BRCA1-222ENST00000493919 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-222ENST00000493919 NGFP01138 241 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 MTCP1P56278 107 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 LGALS4P56470 323 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 FOXI1Q12951 378 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 MSMPQ1L6U9 139 aa9.46□□□□□ -0.89
BRCA1-222ENST00000493919 LIAT1Q6ZQX7 453 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms