RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 GRAMD2BQ96HH9 432 aa11.44□□□□□ -0.58
SMPD4-220ENST00000491319 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
SMPD4-220ENST00000491319 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 CRYM-AS1A6NIL9 109 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 DISC1C4P0D8 188 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 AKAIN1P0CW23 69 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 DHODHQ02127 395 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 SURF2Q15527 256 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-220ENST00000491319 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 MRPS26Q9BYN8 205 aaKnown RBP11.43□□□□□ -0.58
SMPD4-220ENST00000491319 PRR13Q9NZ81 148 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 GPR132Q9UNW8 380 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 U3KQE9 123 aa11.43□□□□□ -0.58
SMPD4-220ENST00000491319 IFNA4P05014 189 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 OR10J1P30954 320 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 ALDH3B2P48448 385 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 IL18Q14116 193 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 GLMPQ8WWB7 406 aa11.42□□□□□ -0.58
SMPD4-220ENST00000491319 IGHV4-28A0A0C4DH34 117 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 HNRNPCP07910 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 SPP1P10451 314 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 SLC25A4P12235 298 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 DHRS2Q13268 280 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 USF2Q15853 346 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 ACTL10Q5JWF8 245 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 C16orf54Q6UWD8 224 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
SMPD4-220ENST00000491319 C2CD4CQ8TF44 421 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 DIRAS2Q96HU8 199 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
SMPD4-220ENST00000491319 CTDSPLO15194 276 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 IL4P05112 153 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 NPY1RP25929 384 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
SMPD4-220ENST00000491319 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRR20EP86478 221 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRR20CP86479 221 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRR20DP86480 221 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRR20BP86481 221 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRR20AP86496 221 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PSMG4Q5JS54 123 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
SMPD4-220ENST00000491319 Q8WTZ3 238 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 ACY3Q96HD9 319 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 PRRT1Q99946 306 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 CLEC5AQ9NY25 188 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 X6R8D5 127 aa11.4□□□□□ -0.58
SMPD4-220ENST00000491319 ANKRD20A5PA0PJZ0 165 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 HELTA6NFD8 242 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-220ENST00000491319 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 NMSQ5H8A3 153 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 DYNC2LI1Q8TCX1 351 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 CCDC59Q9P031 241 aaKnown RBP11.39□□□□□ -0.59
SMPD4-220ENST00000491319 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
SMPD4-220ENST00000491319 IGLL5B9A064 214 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 TOMM40O96008 361 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 MIFP14174 115 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 IL22RA2Q969J5 263 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 RAB40CQ96S21 281 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
SMPD4-220ENST00000491319 DNAH10Q8IVF4 4471 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-220ENST00000491319 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 IFNA10P01566 189 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-220ENST00000491319 SIGLEC15Q6ZMC9 328 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 CSNK1G2-AS1Q8NCQ2 148 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 RAB2BQ8WUD1 216 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-220ENST00000491319 APLNQ9ULZ1 77 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 RABL2BQ9UNT1 228 aa11.37□□□□□ -0.59
SMPD4-220ENST00000491319 C11orf94C9JXX5 98 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 BUB3O43684 328 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 GSTZ1O43708 216 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-220ENST00000491319 RD3LP0DJH9 198 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 PSG1P11464 419 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 AKR1C4P17516 323 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 TCTAP57738 103 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
SMPD4-220ENST00000491319 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 Q6ZTC4 211 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 LYZL2Q7Z4W2 148 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 NOXA1Q86UR1 476 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 OR51G1Q8NGK1 321 aa11.36□□□□□ -0.59
SMPD4-220ENST00000491319 DTD1Q8TEA8 209 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms