RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GLYATL2Q8WU03 294 aa14.4□□□□□ -0.1
SREBF1-216ENST00000490796 RTBDNQ9BSG5 229 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-216ENST00000490796 MIXL1Q9H2W2 232 aa14.4□□□□□ -0.1
SREBF1-216ENST00000490796 CACFD1Q9UGQ2 172 aa14.4□□□□□ -0.1
SREBF1-216ENST00000490796 KNCNA6PVL3 124 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 DEDDO75618 318 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 HNRNPCP07910 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
SREBF1-216ENST00000490796 SMIM18P0DKX4 95 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 OR10J1P30954 320 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 AP2S1P53680 142 aaPredicted RBP14.39□□□□□ -0.11
SREBF1-216ENST00000490796 IL18Q14116 193 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 C2orf83Q53S99 150 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 ACTL10Q5JWF8 245 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 KCNIP3Q9Y2W7 256 aa14.39□□□□□ -0.11
SREBF1-216ENST00000490796 CTDSP2O14595 271 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 TCTAP57738 103 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 AARDQ4LEZ3 155 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 PRSS54Q6PEW0 395 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 TRPT1Q86TN4 253 aaKnown RBP14.38□□□□□ -0.11
SREBF1-216ENST00000490796 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 SMIM4Q8WVI0 70 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 GPR146Q96CH1 333 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 DIRAS2Q96HU8 199 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 PRRT1Q99946 306 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 RABL2AQ9UBK7 228 aaPredicted RBP14.38□□□□□ -0.11
SREBF1-216ENST00000490796 RABL2BQ9UNT1 228 aa14.38□□□□□ -0.11
SREBF1-216ENST00000490796 CRYM-AS1A6NIL9 109 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 IGLC1P0CG04 106 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 MIFP14174 115 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 NPY1RP25929 384 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 YPEL3P61236 119 aaPredicted RBP14.37□□□□□ -0.11
SREBF1-216ENST00000490796 OR4C16Q8NGL9 310 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 ACY3Q96HD9 319 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 SCGB3A2Q96PL1 93 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 MRPS26Q9BYN8 205 aaKnown RBP14.37□□□□□ -0.11
SREBF1-216ENST00000490796 KMT2AQ03164 3969 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 AGRNO00468 2067 aa14.37□□□□□ -0.11
SREBF1-216ENST00000490796 IGHV4-28A0A0C4DH34 117 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 IGLL5B9A064 214 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 C11orf94C9JXX5 98 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 GSTZ1O43708 216 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-216ENST00000490796 NXPH3O95157 252 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 IFNA10P01566 189 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 IL4P05112 153 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 SULT1A3P0DMM9 295 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 SULT1A4P0DMN0 295 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 SNRPD3P62318 126 aaKnown RBP14.36□□□□□ -0.11
SREBF1-216ENST00000490796 PSMG4Q5JS54 123 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 CLVS1Q8IUQ0 354 aaPredicted RBP14.36□□□□□ -0.11
SREBF1-216ENST00000490796 DCANP1Q8TF63 244 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 SCP2D1Q9UJQ7 156 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 GPR132Q9UNW8 380 aa14.36□□□□□ -0.11
SREBF1-216ENST00000490796 C16orf54Q6UWD8 224 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 Q8NAQ8 132 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 OR51S1Q8NGJ8 323 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 NPIPB3Q92617 1050 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 HRH4Q9H3N8 390 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 TMEM56-RWDD3S4R434 201 aa14.35□□□□□ -0.11
SREBF1-216ENST00000490796 CTDSPLO15194 276 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 RD3LP0DJH9 198 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 NUTF2P61970 127 aaKnown RBP14.34□□□□□ -0.11
SREBF1-216ENST00000490796 SPCS2Q15005 226 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 IL22RA2Q969J5 263 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 PFDN2Q9UHV9 154 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 TBC1D24Q9ULP9 559 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 U3KQE9 123 aa14.34□□□□□ -0.11
SREBF1-216ENST00000490796 GIG44P09565 113 aaPredicted RBP14.33□□□□□ -0.12
SREBF1-216ENST00000490796 C4BPBP20851 252 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 GLMPQ8WWB7 406 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 RAB40CQ96S21 281 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 MCUBQ9NWR8 336 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 CLEC5AQ9NY25 188 aa14.33□□□□□ -0.12
SREBF1-216ENST00000490796 FRAS1Q86XX4 4008 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 TOMM40O96008 361 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 ANXA3P12429 323 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 USF2Q15853 346 aaPredicted RBP14.32□□□□□ -0.12
SREBF1-216ENST00000490796 SIGLEC15Q6ZMC9 328 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 C1QTNF4Q9BXJ3 329 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 RSL24D1Q9UHA3 163 aaKnown RBP14.32□□□□□ -0.12
SREBF1-216ENST00000490796 U3KQ87 197 aa14.32□□□□□ -0.12
SREBF1-216ENST00000490796 ZNF705EA8MWA4 302 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 NOL3O60936 208 aaKnown RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 RBMY1A1P0DJD3 496 aaKnown RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 RBMY1CP0DJD4 496 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 AKR1C4P17516 323 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 NUP62P37198 522 aaPredicted RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 ALDH3B2P48448 385 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 CCR6P51684 374 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 SMCO1Q147U7 214 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 RBMY1FQ15415 496 aaKnown RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 LGI3Q8N145 548 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 DTD1Q8TEA8 209 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 RAB2BQ8WUD1 216 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 PRR13Q9NZ81 148 aa14.31□□□□□ -0.12
SREBF1-216ENST00000490796 CCDC59Q9P031 241 aaKnown RBP14.31□□□□□ -0.12
SREBF1-216ENST00000490796 TRAV10A0A0B4J240 114 aa14.3□□□□□ -0.12
SREBF1-216ENST00000490796 ANKRD20A5PA0PJZ0 165 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms