RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ZNF355PQ9NSJ1 428 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 ANKHD1Q8IWZ3 2542 aaKnown RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 K7EN84 100 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 FABP4P15090 132 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 PLP1P60201 277 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 ZNF90Q03938 601 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 RITA1Q96K30 269 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
COL9A1-208ENST00000489611 DPM3Q9P2X0 92 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 HIVEP3Q5T1R4 2406 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 IGHV3-72A0A0B4J1Y9 119 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 GCGP01275 180 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 TPTE2P1Q5T6R2 138 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 GFI1BQ5VTD9 330 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 DTX2Q86UW9 622 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 KIR3DL3Q8N743 410 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 ONECUT1Q9UBC0 465 aa11.98□□□□□ -0.49
COL9A1-208ENST00000489611 OOSP1A8MZH6 123 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 MT-ND6P03923 174 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 COX7A1P24310 79 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 GPR6P46095 362 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-208ENST00000489611 CTAG1AP78358 180 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 PATE2Q6UY27 113 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 LINC00305Q7Z4B0 112 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 TMEM18Q96B42 140 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 CHRDL1Q9BU40 450 aa11.96□□□□□ -0.49
COL9A1-208ENST00000489611 SSBP3Q9BWW4 388 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-208ENST00000489611 LOC105371242A0A075B767 164 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 TEX22C9J3V5 150 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 C19orf84I3L1E1 186 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 HYPMO75409 117 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.5
COL9A1-208ENST00000489611 PRTN3P24158 256 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 CLEC12BQ2HXU8 276 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 CCDC144NLQ6NUI1 221 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 OR5R1Q8NH85 324 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 SRSF12Q8WXF0 261 aaKnown RBP11.96□□□□□ -0.5
COL9A1-208ENST00000489611 V9GYV3 84 aa11.96□□□□□ -0.5
COL9A1-208ENST00000489611 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 REG1AP05451 166 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 LGALS4P56470 323 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 PLGLAQ15195 96 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 PDZD11Q5EBL8 140 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 HCP5Q6MZN7 132 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 NPBQ8NG41 125 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
COL9A1-208ENST00000489611 SSBP2P81877 361 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-208ENST00000489611 FAM231DQ6ZW35 169 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 S100A7AQ86SG5 101 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 FXYD5Q96DB9 178 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 ZFYVE26Q68DK2 2539 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 ODF3BA8MYP8 253 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 C22orf46C9J442 243 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 NDUFA3O95167 84 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 MOSP00540 346 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 CNTFRP26992 372 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 MFAP2P55001 183 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 JOSD1Q15040 202 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-208ENST00000489611 RNF24Q9Y225 148 aa11.94□□□□□ -0.5
COL9A1-208ENST00000489611 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 PEX7O00628 323 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 TIMM23O14925 209 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 NBR2O15453 112 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 AMBPP02760 352 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 HNF1AP20823 631 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 CX3CL1P78423 397 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
COL9A1-208ENST00000489611 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 RBM14Q96PK6 669 aaKnown RBP11.93□□□□□ -0.5
COL9A1-208ENST00000489611 FBXL15Q9H469 300 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
COL9A1-208ENST00000489611 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
COL9A1-208ENST00000489611 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 CNIH1O95406 144 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 ORM2P19652 201 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 MYCNOSP40205 109 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 MMDQ15546 238 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 MINOS1Q5TGZ0 78 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 RASL11AQ6T310 242 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 OR1B1Q8NGR6 318 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 MINOS1-NBL1R4GNA1 71 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 RNF224P0DH78 156 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 CFHR4Q92496 578 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 TMEM14CQ9P0S9 112 aa11.92□□□□□ -0.5
COL9A1-208ENST00000489611 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 I3L2K1 104 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 SLC17A3O00476 420 aa11.91□□□□□ -0.5
COL9A1-208ENST00000489611 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms