RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ZP3P21754 424 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 OR10J1P30954 320 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 ZNF266Q14584 549 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 CLINT1Q14677 625 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 TEPPQ6URK8 271 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 KCNRGQ8N5I3 272 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 FBXL17Q9UF56 701 aa10.72□□□□□ -0.69
C9orf3-221ENST00000489562 FBN1P35555 2871 aaKnown RBP10.72□□□□□ -0.69
C9orf3-221ENST00000489562 A0A1W2PRX2 142 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 ANKRD34BA5PLL1 514 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 ZFP92A6NM28 416 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.69
C9orf3-221ENST00000489562 IFNA5P01569 189 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 CTSGP08311 255 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 IGLC1P0CG04 106 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.69
C9orf3-221ENST00000489562 RELQ04864 619 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-221ENST00000489562 RAB31Q13636 194 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 C8orf86Q6ZUL3 223 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 DPF1Q92782 380 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 TRGV9Q99603 122 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 PARD6GQ9BYG4 376 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-221ENST00000489562 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
C9orf3-221ENST00000489562 BORCS7-ASMTA0A0B4J1R7 106 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 LINC01619G3V211 115 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 BMPR1BO00238 502 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 CXCL2P19875 107 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 C4BPBP20851 252 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 YPEL3P61236 119 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-221ENST00000489562 ZNF616Q08AN1 781 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 NSUN5P1Q3KNT7 163 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 C18orf65Q6ZTR6 163 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 OR4F17Q8NGA8 305 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 OR1N2Q8NGR9 330 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 PPP1R14BQ96C90 147 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 OR4F4Q96R69 305 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 ARPC5LQ9BPX5 153 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
C9orf3-221ENST00000489562 LSM4Q9Y4Z0 139 aaKnown RBP10.7□□□□□ -0.7
C9orf3-221ENST00000489562 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 IGHV4OR15-8A0A075B7B6 117 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 A0A087WW49 117 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 KANTRA0A1W2PQU2 76 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 PPP5D1E7EU14 171 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
C9orf3-221ENST00000489562 IGKV1-17P01599 117 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 ADMP35318 185 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 MYCNOSP40205 109 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 SELENOTP62341 195 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 FHL3Q13643 280 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 BTNL8Q6UX41 500 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 ZNF600Q6ZNG1 722 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 SCGB1C1Q8TD33 95 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 TENM1Q9UKZ4 2725 aa10.69□□□□□ -0.7
C9orf3-221ENST00000489562 IGKV1D-37A0A075B6S9 117 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 CCL24O00175 119 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 NDUFA4O00483 81 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 BCL2L11O43521 198 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 JTBO76095 146 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 TOMM40O96008 361 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 FGF7P21781 194 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 LGALSLQ3ZCW2 172 aaPredicted RBP10.68□□□□□ -0.7
C9orf3-221ENST00000489562 TIGITQ495A1 244 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 FAM106AQ4KMX7 169 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 TMUB2Q71RG4 321 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 MDFIQ99750 246 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
C9orf3-221ENST00000489562 WFDC1Q9HC57 220 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 STAB1Q9NY15 2570 aa10.68□□□□□ -0.7
C9orf3-221ENST00000489562 C17orf112F2Z3M2 114 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 M0QZ24 198 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 AGPAT2O15120 278 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 RD3LP0DJH9 198 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-221ENST00000489562 CAMLGP49069 296 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
C9orf3-221ENST00000489562 HIST2H2BDQ6DRA6 164 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 CYP2G1PQ6ZSU1 146 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 ZNF709Q8N972 641 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 BPIFCQ8NFQ6 507 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 Q8WTZ3 238 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 NPCDR1Q9BY65 106 aa10.67□□□□□ -0.7
C9orf3-221ENST00000489562 OR2C1O95371 312 aa10.66□□□□□ -0.7
C9orf3-221ENST00000489562 PF4P02776 101 aa10.66□□□□□ -0.7
C9orf3-221ENST00000489562 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.71e-7■■■■□ 22.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms