RNA–Protein interactions for RNA: ENST00000489356.1

FGD2-208, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 2

Gene FGD2, Length 1,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-208ENST00000489356 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.33
FGD2-208ENST00000489356 RNASEH2CQ8TDP1 164 aaKnown RBP13.02□□□□□ -0.33
FGD2-208ENST00000489356 RNF183Q96D59 192 aa13.02□□□□□ -0.33
FGD2-208ENST00000489356 CSTL1Q9H114 145 aa13.02□□□□□ -0.33
FGD2-208ENST00000489356 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 SLC25A4P12235 298 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 OR10J1P30954 320 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 CCR6P51684 374 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 SUPT4H1P63272 117 aaKnown RBP13.01□□□□□ -0.33
FGD2-208ENST00000489356 KLF9Q13886 244 aaPredicted RBP13.01□□□□□ -0.33
FGD2-208ENST00000489356 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 OR1S2Q8NGQ3 325 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 Q8WTZ3 238 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 ACY3Q96HD9 319 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 CACFD1Q9UGQ2 172 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 SHPKQ9UHJ6 478 aa13.01□□□□□ -0.33
FGD2-208ENST00000489356 P2RY1P47900 373 aa13□□□□□ -0.33
FGD2-208ENST00000489356 SRPXP78539 464 aa13□□□□□ -0.33
FGD2-208ENST00000489356 TNFRSF9Q07011 255 aa13□□□□□ -0.33
FGD2-208ENST00000489356 RBMS2Q15434 407 aaKnown RBP13□□□□□ -0.33
FGD2-208ENST00000489356 FAM24BQ8N5W8 94 aa13□□□□□ -0.33
FGD2-208ENST00000489356 DTD1Q8TEA8 209 aa13□□□□□ -0.33
FGD2-208ENST00000489356 TMEM170AQ8WVE7 144 aa13□□□□□ -0.33
FGD2-208ENST00000489356 NPIPB3Q92617 1050 aa13□□□□□ -0.33
FGD2-208ENST00000489356 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
FGD2-208ENST00000489356 RBKSQ9H477 322 aa13□□□□□ -0.33
FGD2-208ENST00000489356 DYNC2H1Q8NCM8 4307 aaKnown RBP13□□□□□ -0.33
FGD2-208ENST00000489356 IGLC1P0CG04 106 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 VAMP1P23763 118 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 CRYBB3P26998 211 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 NMSQ5H8A3 153 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 TRIM63Q969Q1 353 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 V9GYH0 126 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 STARD9Q9P2P6 4700 aa12.99□□□□□ -0.33
FGD2-208ENST00000489356 IFNA4P05014 189 aa12.98□□□□□ -0.33
FGD2-208ENST00000489356 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
FGD2-208ENST00000489356 U3KQ87 197 aa12.98□□□□□ -0.33
FGD2-208ENST00000489356 HSPB7Q9UBY9 170 aa12.97□□□□□ -0.33
FGD2-208ENST00000489356 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
FGD2-208ENST00000489356 TRAV2A0A0B4J234 112 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
FGD2-208ENST00000489356 IL4P05112 153 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 HNRNPCP07910 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
FGD2-208ENST00000489356 RD3LP0DJH9 198 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.33
FGD2-208ENST00000489356 ZNF79Q15937 498 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 TMEM128Q5BJH2 165 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 STHQ8IWL8 128 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 RARRES2Q99969 163 aa12.96□□□□□ -0.33
FGD2-208ENST00000489356 ZNF688P0C7X2 276 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 IAPPP10997 89 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 INPP1P49441 399 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.34
FGD2-208ENST00000489356 DHRS2Q13268 280 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 CCDC190Q86UF4 302 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 TMEM217Q8N7C4 229 aa12.96□□□□□ -0.34
FGD2-208ENST00000489356 SLC25A21Q9BQT8 299 aaPredicted RBP12.96□□□□□ -0.34
FGD2-208ENST00000489356 SACSQ9NZJ4 4579 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 PIGBOS1A0A0B4J2F0 54 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 K7EQG2 157 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
FGD2-208ENST00000489356 SPANXN2Q5MJ10 180 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 OR11H2Q8NH07 326 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 GATAD1Q8WUU5 269 aa12.95□□□□□ -0.34
FGD2-208ENST00000489356 HELTA6NFD8 242 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 TOMM40O96008 361 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 OR51G1Q8NGK1 321 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 SLC35E1Q96K37 410 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 U3KQE9 123 aa12.94□□□□□ -0.34
FGD2-208ENST00000489356 RYR2Q92736 4967 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 LINC00854A0A1B0GVQ3 168 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 ZFP92A6NM28 416 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 SFT2D2O95562 160 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 PSG1P11464 419 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 CENPSQ8N2Z9 138 aa12.93□□□□□ -0.34
FGD2-208ENST00000489356 RBM38Q9H0Z9 239 aaKnown RBP12.93□□□□□ -0.34
FGD2-208ENST00000489356 NUPR2A6NF83 97 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 HOXB5P09067 269 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
FGD2-208ENST00000489356 RAB11AP62491 216 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 ACTL10Q5JWF8 245 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
FGD2-208ENST00000489356 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 MAGT1Q9H0U3 335 aa12.92□□□□□ -0.34
FGD2-208ENST00000489356 DEFB4AO15263 64 aa12.91□□□□□ -0.34
FGD2-208ENST00000489356 PITX3O75364 302 aa12.91□□□□□ -0.34
FGD2-208ENST00000489356 GPX4P36969 197 aaPredicted RBP12.91□□□□□ -0.34
FGD2-208ENST00000489356 ATP5IP56385 69 aaPredicted RBP12.91□□□□□ -0.34
FGD2-208ENST00000489356 GAMTQ14353 236 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms