RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TP53TG1Q9Y2A0 90 aa10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
SPTLC1-207ENST00000488921 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 CEBPZOSA8MTT3 80 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 INMT-MINDY4F8WBC2 141 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 CLN5O75503 358 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 ANXA7P20073 488 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 TMEM187Q14656 261 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 C2orf83Q53S99 150 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 Q6ZWC4 215 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 NOXA1Q86UR1 476 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 SLC24A4Q8NFF2 622 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 GPN1Q9HCN4 374 aaPredicted RBP10.26□□□□□ -0.77
SPTLC1-207ENST00000488921 IGHV3-49A0A0A0MS15 119 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 A0A0B4J2A0 478 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 A0A1W2PS18 150 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 OR4E1P0C645 316 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 SLC25A4P12235 298 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 TMEM230Q96A57 120 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 NARS2Q96I59 477 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 METTL26Q96S19 204 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 FNDC4Q9H6D8 234 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 VSIRQ9H7M9 311 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 SHPKQ9UHJ6 478 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 SACSQ9NZJ4 4579 aa10.25□□□□□ -0.77
SPTLC1-207ENST00000488921 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 PRAF2O60831 178 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 SFT2D2O95562 160 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 NPPCP23582 126 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 TFPI2P48307 235 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 ETFRF1Q6IPR1 90 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 WFDC3Q8IUB2 231 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 LGI3Q8N145 548 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 COQ8AQ8NI60 647 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 ST8SIA2Q92186 375 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
SPTLC1-207ENST00000488921 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 LCE6AA0A183 80 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 A0A1B0GU03 582 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 DUXBA0A1W2PPF3 345 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 C9orf170A2RU37 121 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 SPRY2O43597 315 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 IL5P05113 134 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 NPY1RP25929 384 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 TNFRSF9Q07011 255 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 PPP1R1AQ13522 171 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 SMCO1Q147U7 214 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 DEFB135Q30KP9 77 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 NMSQ5H8A3 153 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 LYG2Q86SG7 212 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 GRAMD2BQ96HH9 432 aa10.23□□□□□ -0.77
SPTLC1-207ENST00000488921 DFFBO76075 338 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 NXPH3O95157 252 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 CRYBB3P26998 211 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 RND2P52198 227 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 RPL11P62913 178 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 SUPT4H1P63272 117 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 DHRS2Q13268 280 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 OXA1LQ15070 435 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 GBGT1Q8N5D6 347 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 DTD1Q8TEA8 209 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 MS4A6AQ9H2W1 248 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 MAP6D1Q9H9H5 199 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 MRPL36Q9P0J6 103 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 HSPB7Q9UBY9 170 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 U3KQ87 197 aa10.22□□□□□ -0.77
SPTLC1-207ENST00000488921 JTBO76095 146 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 IFNA10P01566 189 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 IGKV1-17P01599 117 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 APOHP02749 345 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 IGLC1P0CG04 106 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 OR10J1P30954 320 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 ATP5IP56385 69 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 MLANAQ16655 118 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 TIGITQ495A1 244 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 PRSS54Q6PEW0 395 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 LYZL2Q7Z4W2 148 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 ZNF431Q8TF32 576 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 Q8WTZ3 238 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 RNF183Q96D59 192 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms