RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 RPL39P5Q59GN2 51 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 ARRDC1-AS1Q9H2J1 176 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 GEMIN7Q9H840 131 aaKnown RBP13.24□□□□□ -0.29
MCF2L-229ENST00000488765 TET2Q6N021 2002 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-229ENST00000488765 INTS1Q8N201 2190 aaKnown RBP13.23□□□□□ -0.29
MCF2L-229ENST00000488765 GFRA3O60609 400 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 C18orf15Q96N68 181 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 OR5AL1P0C617 328 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 P0C879 139 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 ANXA2RQ3ZCQ2 193 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 Q6P435 159 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF497Q6ZNH5 498 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 TMEM105Q8N8V8 129 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 MBD6Q96DN6 1003 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 IDI2-AS1Q9NZ38 188 aa13.23□□□□□ -0.29
MCF2L-229ENST00000488765 ANKRD30BLA7E2S9 258 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 J3QR06 171 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 EXPH5Q8NEV8 1989 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 PCNX1Q96RV3 2341 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 PIGBOS1A0A0B4J2F0 54 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 H3BRM9 83 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 UBE2L3P68036 154 aaKnown RBP13.22□□□□□ -0.29
MCF2L-229ENST00000488765 LINC00322Q6ZN03 302 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-229ENST00000488765 Q71RC1 249 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-229ENST00000488765 H1FXQ92522 213 aaKnown RBP13.22□□□□□ -0.29
MCF2L-229ENST00000488765 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-229ENST00000488765 SEC11AP67812 179 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 ALKBH6Q3KRA9 238 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 OR10D3Q8NH80 312 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 OR2V2Q96R30 315 aa13.22□□□□□ -0.29
MCF2L-229ENST00000488765 ACP1P24666 158 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 FOXF2Q12947 444 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
MCF2L-229ENST00000488765 Q8TCH9 128 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 IGKV1OR2-108A0A075B7D4 117 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 H3BMG7 143 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-229ENST00000488765 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-229ENST00000488765 SFTA2Q6UW10 78 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 HSPB8Q9UJY1 196 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
MCF2L-229ENST00000488765 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 COX19Q49B96 90 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 UTF1Q5T230 341 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 C1orf210Q8IVY1 113 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 IGF2BP2-AS1Q96M15 143 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 GNG3P63215 75 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 LOXL1Q08397 574 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-229ENST00000488765 CRXO43186 299 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-229ENST00000488765 APOHP02749 345 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-229ENST00000488765 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-229ENST00000488765 CHODLQ9H9P2 273 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 DSCAML1Q8TD84 2053 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 NAV3Q8IVL0 2385 aa13.2□□□□□ -0.3
MCF2L-229ENST00000488765 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 CHRNA10Q9GZZ6 450 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 PROK2Q9HC23 129 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 A1L4Q6 167 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 A8MWL6 223 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 NKX2-8O15522 239 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 MPDU1O75352 247 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 PCBD1P61457 104 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 TCF19Q9Y242 345 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 LY96Q9Y6Y9 160 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 ACACAQ13085 2346 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 CADP27708 2225 aa13.19□□□□□ -0.3
MCF2L-229ENST00000488765 PROP1O75360 226 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 SPINK14Q6IE38 97 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 WDR86Q86TI4 376 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 SPAG8Q99932 426 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-229ENST00000488765 SMPXQ9UHP9 88 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 FXYD2P54710 66 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 HBBP68871 147 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 TMEM249Q2WGJ8 235 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 GTSF1Q8WW33 167 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 LIPFP07098 398 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 FADS6Q8N9I5 356 aa13.18□□□□□ -0.3
MCF2L-229ENST00000488765 FOLR3P41439 243 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 CACNG7P62955 275 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 ATMQ13315 3056 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-229ENST00000488765 C20orf78Q9BR46 151 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 NHP2Q9NX24 153 aaKnown RBP13.17□□□□□ -0.3
MCF2L-229ENST00000488765 GNG12Q9UBI6 72 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms