RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 INPP1P49441 399 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 OR1S2Q8NGQ3 325 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 METTL26Q96S19 204 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 MAP6D1Q9H9H5 199 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 DFFBO76075 338 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
ITGB1-215ENST00000488494 NPPCP23582 126 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
ITGB1-215ENST00000488494 RBMS2Q15434 407 aaKnown RBP13.14□□□□□ -0.31
ITGB1-215ENST00000488494 ZNF124Q15973 351 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 DEFB135Q30KP9 77 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
ITGB1-215ENST00000488494 CD5P06127 495 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 BAK1Q16611 211 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 ETFRF1Q6IPR1 90 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 MS4A6AQ9H2W1 248 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 U3KQ87 197 aa13.13□□□□□ -0.31
ITGB1-215ENST00000488494 SFT2D2O95562 160 aa13.12□□□□□ -0.31
ITGB1-215ENST00000488494 CRYBB3P26998 211 aa13.12□□□□□ -0.31
ITGB1-215ENST00000488494 P2RY1P47900 373 aa13.12□□□□□ -0.31
ITGB1-215ENST00000488494 NARS2Q96I59 477 aaKnown RBP13.12□□□□□ -0.31
ITGB1-215ENST00000488494 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
ITGB1-215ENST00000488494 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 LINC00854A0A1B0GVQ3 168 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 A0A1W2PS18 150 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-215ENST00000488494 PITX3O75364 302 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 IFNA4P05014 189 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 IAPPP10997 89 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 YPEL3P61236 119 aaPredicted RBP13.11□□□□□ -0.31
ITGB1-215ENST00000488494 Q6ZWC4 215 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
ITGB1-215ENST00000488494 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 UBE2CO00762 179 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 NDUFB6O95139 128 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 IL4P05112 153 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-215ENST00000488494 Q8WTZ3 238 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 SDHCQ99643 169 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-215ENST00000488494 TP53TG1Q9Y2A0 90 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
ITGB1-215ENST00000488494 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 SPRY2O43597 315 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 TOMM40O96008 361 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.316e-6■■■■□ 19.3
ITGB1-215ENST00000488494 HOXB5P09067 269 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 SLC25A6P12236 298 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
ITGB1-215ENST00000488494 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
ITGB1-215ENST00000488494 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 GRAMD2BQ96HH9 432 aa13.09□□□□□ -0.31
ITGB1-215ENST00000488494 LYSTQ99698 3801 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 FAM90A26D6RGX4 464 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 RD3LP0DJH9 198 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 DEFB131AP59861 70 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 SLC35E1Q96K37 410 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 MAGT1Q9H0U3 335 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 PAIP2BQ9ULR5 123 aaKnown RBP13.08□□□□□ -0.32
ITGB1-215ENST00000488494 FLVCR2Q9UPI3 526 aa13.08□□□□□ -0.32
ITGB1-215ENST00000488494 LCE6AA0A183 80 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 IL7P13232 177 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 BTCP35070 178 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 ATP5IP56385 69 aaPredicted RBP13.07□□□□□ -0.32
ITGB1-215ENST00000488494 GGNBP1Q5YKI7 109 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 RNF183Q96D59 192 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 U3KQE9 123 aa13.07□□□□□ -0.32
ITGB1-215ENST00000488494 A0A0J9YWU9 116 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 C9orf170A2RU37 121 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 ZFP92A6NM28 416 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 K7EQG2 157 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 MED6O75586 246 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 PSG1P11464 419 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 EIF2B2P49770 351 aaKnown RBP13.06□□□□□ -0.32
ITGB1-215ENST00000488494 GAMTQ14353 236 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 OR51G1Q8NGK1 321 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
ITGB1-215ENST00000488494 HELTA6NFD8 242 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 CENPXA8MT69 81 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 MPTX1A8MV57 137 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 ADAP1O75689 374 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms